Dechloromonas sp. TW-R-39-2: GBK02_15935
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Entry
GBK02_15935 CDS
T08942
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
dech
Dechloromonas sp. TW-R-39-2
Brite
KEGG Orthology (KO) [BR:
dech00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dech03032
]
GBK02_15935
03036 Chromosome and associated proteins [BR:
dech03036
]
GBK02_15935
03400 DNA repair and recombination proteins [BR:
dech03400
]
GBK02_15935
DNA replication proteins [BR:
dech03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GBK02_15935
Chromosome and associated proteins [BR:
dech03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
GBK02_15935
DNA repair and recombination proteins [BR:
dech03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GBK02_15935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TetR_C_30
Motif
Other DBs
NCBI-ProteinID:
QRM20757
UniProt:
A0A974SY81
LinkDB
All DBs
Position
complement(3292585..3292890)
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AA seq
101 aa
AA seq
DB search
MTRSELNAALAQRFPQLMQKDAEMAVTEILGAIATALAAGNRVEIRGFGSFALNYRPPRT
GRNPKTGEKVAVRGKFVPHFKAGKELRDLVDTSQTSGALLR
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgacccgatccgaactgaatgctgcgctggcccagcgtttcccacaactgatgcagaaa
gatgctgaaatggccgtgaccgagattcttggcgcgattgcgacggcattagctgcagga
aatcgcgtcgaaattcgtggttttggctcatttgccttgaactatcgacctccgcgcaca
ggcagaaaccctaagactggtgaaaaggtagctgtccgtggcaaattcgtaccgcacttt
aaagcggggaaggagttgcgtgacttggttgatacctcgcaaacttccggtgctttactg
aggtag
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