Dechloromonas sp. TW-R-39-2: GBK02_16495
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Entry
GBK02_16495 CDS
T08942
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dech
Dechloromonas sp. TW-R-39-2
Pathway
dech03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dech00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GBK02_16495 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dech03400
]
GBK02_16495 (mutM)
Enzymes [BR:
dech01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GBK02_16495 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GBK02_16495 (mutM)
DNA repair and recombination proteins [BR:
dech03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GBK02_16495 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QRM20859
UniProt:
A0A974Y923
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All DBs
Position
complement(3409763..3410596)
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AA seq
277 aa
AA seq
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MPELPEVEVCRRGLEPELLGAQIEQVIIRSPKLRHVIPVELRDLLPGCRIVGIRRRGKYL
LIDCRSDSVQGSLLVHLGMSGSLRFVAHGQPVVKHDHFELVLARHVLRFADPRRFGLILW
QSGPPEESEQHPLLAIQGIEPLSDDFTVNWLYQANLKRSGPIKPLLMDSHRVVGIGNIYA
SESLFRAGISPLRAANKISKARYGLLVPAIRQTLSDAIAAGGSTIRNYMHSDGSSGWFQI
QVGVYDRAGEPCLRCGGVVKQVRQAGRSTFYCPGCQH
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgccggaagtcgaagtctgtcgtcgcggcctggagcccgagctactcggt
gcgcagatcgagcaggtcatcattcgttcgcccaagctgcgccatgtcattccggtcgag
ttgcgcgacttgttgccgggctgccggatcgtcggcatacgccggcgcgggaaatacctg
ttgatcgattgccgcagcgacagcgtgcagggcagcctgctggtgcatctcggcatgtct
ggcagcctgcgctttgtggcgcacggtcagcccgtcgtcaaacatgatcatttcgagctg
gtcctggcgcgccatgtgctgcggtttgccgatccgcgccgttttggactgattctctgg
cagtccggcccgccggaagagagcgaacagcatcccttgctggccattcagggcatcgag
cccttgtcggacgatttcacggtcaactggctgtatcaggcaaatttgaaacgttccggg
ccgatcaagccgctgctgatggattcgcaccgggtggtcgggatcggcaatatctatgcg
tcggaaagtctgttccgggccggcatttcgccgctacgcgctgccaataaaatcagcaag
gcgcgctatggcctgctggtgccggccatccgccaaacactgtcggatgccattgcagcg
ggtggcagcaccattcgtaactacatgcacagcgacgggagcagcggctggttccagatc
caggtaggcgtttacgaccgggctggcgagccttgtttgcgttgcggcggcgtggtcaag
caagtgcgccaggccgggcgcagtactttttactgccccggttgccagcattag
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