KEGG   Dehalobacter sp. DCA: DHBDCA_p1002
Entry
DHBDCA_p1002      CDS       T02278                                 
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
ded  Dehalobacter sp. DCA
Brite
KEGG Orthology (KO) [BR:ded00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ded03009]
    DHBDCA_p1002
Enzymes [BR:ded01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     DHBDCA_p1002
Ribosome biogenesis [BR:ded03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    DHBDCA_p1002
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2 SYY_C-terminal
Other DBs
NCBI-ProteinID: AFV02029
LinkDB
Position
complement(1048929..1049687)
AA seq 252 aa
MDCSGDQSERLQKAMARLGVASRRHAEILISQGLVKVNGQTVTQPGFKVTPEDVIEVNAK
TYSSGPSEDLVYVMLYKPAGVITSVTDPHQRKTVIDLLGQNIKERVYPVGRLDYDTSGLL
LLTNDGELTFRLTHPSFGVEKVYRASVAGNISDQAIRTLESGVHLEDGMTSPAKIKKLSR
DKSGNQTEIELAIHEGKNRQVRRMLEQVGYPVFRLRRICFGPLQLDPKMTAGEYRLLTTS
EVNALKEAVSIR
NT seq 759 nt   +upstreamnt  +downstreamnt
atggattgttccggagatcaatctgaacgtttgcaaaaagcgatggctcgtttgggcgtc
gcttctcggcgtcatgccgaaattctaatcagtcagggacttgtaaaagtgaatggacag
accgtaacgcagccgggttttaaggtaacgcctgaggatgtcatcgaagtcaacgctaag
acgtattcttcaggaccaagcgaagacctggtctacgtcatgctttataaacctgcgggt
gttattacaagtgttacggatccccatcaaaggaaaacggtcattgatttacttggccag
aatattaaagaaagagtctatccagtcggcagactggattatgacacttcaggacttctg
cttctgaccaatgacggggaacttacatttcggctgacgcatccaagttttggcgtggaa
aaagtataccgggcctcagtcgccggtaatatttctgatcaggcaatcaggacgcttgag
tcgggtgtacacctcgaggatggtatgacttctcctgcgaaaattaagaagctttcccgt
gataaaagcggcaaccagaccgaaattgagcttgccattcacgaaggaaagaacaggcag
gtcaggagaatgcttgagcaggtcggataccccgtttttcgcttgcgcagaatctgtttt
ggcccgctccagctggatccaaaaatgacggcaggagaataccgactgttaacgacttct
gaagtcaatgctttgaaggaagcagtaagtatacggtga

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