Dehalobacter sp. DCA: DHBDCA_p1456
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Entry
DHBDCA_p1456 CDS
T02278
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ded
Dehalobacter sp. DCA
Brite
KEGG Orthology (KO) [BR:
ded00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ded03009
]
DHBDCA_p1456
Enzymes [BR:
ded01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
DHBDCA_p1456
Ribosome biogenesis [BR:
ded03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DHBDCA_p1456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Ub-RnfH
HEPN_Apea
Motif
Other DBs
NCBI-ProteinID:
AFV02485
LinkDB
All DBs
Position
complement(1474280..1475245)
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AA seq
321 aa
AA seq
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MTNHYFEEETQDHFIEEPDSEEWQFVQAAPGQRLDTALAECTSLSRSYIQNLIQQERVLV
NSQPKKANYRVQEEDRIEISIPPAQKLDVLPEELPLEIVYEDDDLLVVNKPQGMVVHPAP
GAWSGTLVNALLYHCQNLSGINGVIRPGIIHRIDKDTSGLLVVAKTDNAHHHLAHQIKEH
SVGRSYRAVIHGLMSEPSGTVDAPIGRDPKDRKKMAVVFKNSRNAVTHYYVLERFMHFTE
IKAVLDTGRTHQIRVHMAYLKHPVLGDPLYGPKKNPFGLTGQVLHAETLSFIHPRTGEKM
TFTADPPESFRDVLEKLKNSD
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatcattattttgaagaagaaacgcaggatcattttattgaggagccggacagc
gaggaatggcagtttgttcaggcagctcccggccagcggctggatacggcgctggcggaa
tgcacctcactgagcagaagctatatacaaaaccttatccagcaggaacgcgtgctggtc
aatagccagcctaagaaggccaattaccgggttcaggaagaagaccgtattgagatcagt
attcctcctgcgcagaagctggatgttctgcctgaagaattaccgctggaaattgtgtat
gaagacgatgatcttctcgtcgtcaataaaccccagggcatggtggtgcatcctgctcct
ggtgcgtggagcggaacgctggtcaacgcactgctgtatcactgccaaaacctctccggg
attaatggtgtcatccgcccgggaattattcaccgaatcgacaaagatacttccgggctg
ttggttgttgccaaaacggataacgcgcatcatcatcttgcccatcagattaaagagcac
agtgtcggacgaagctacagggctgtcattcacggattaatgtcggaaccgtcgggaact
gtggatgcacccattggcagagatccaaaggatcgtaagaaaatggcggttgtttttaag
aattcccgcaatgcggtgacgcactattatgttctggaacgatttatgcattttaccgag
atcaaggcggtgttggatacaggaaggacccaccagatcagagtgcatatggcatatttg
aaacaccctgtgctgggagacccgctttacgggccaaagaaaaatccttttggcttgacc
gggcaggttcttcatgccgagacactgagtttcattcatccgcggaccggagaaaagatg
acatttacggcagatccacccgaatcatttcgggacgttctggaaaagctaaagaatagc
gattga
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