Dehalobacter sp. DCA: DHBDCA_p2021
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Entry
DHBDCA_p2021 CDS
T02278
Name
(GenBank) Very-short-patch mismatch repair endonuclease (G-T specific)
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
ded
Dehalobacter sp. DCA
Pathway
ded00270
Cysteine and methionine metabolism
ded01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ded00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
DHBDCA_p2021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ded03000
]
DHBDCA_p2021
03032 DNA replication proteins [BR:
ded03032
]
DHBDCA_p2021
03036 Chromosome and associated proteins [BR:
ded03036
]
DHBDCA_p2021
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ded02048
]
DHBDCA_p2021
Enzymes [BR:
ded01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
DHBDCA_p2021
Transcription factors [BR:
ded03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
DHBDCA_p2021
DNA replication proteins [BR:
ded03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
DHBDCA_p2021
Chromosome and associated proteins [BR:
ded03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
DHBDCA_p2021
Prokaryotic defense system [BR:
ded02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
DHBDCA_p2021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Methyltransf_15
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
AFV03048
LinkDB
All DBs
Position
complement(2046955..2047317)
Genome browser
AA seq
120 aa
AA seq
DB search
MSYNAIDLFSGCGGMTEGLINAGIRVIAAVEIDKFASEAYRANHDKHGVILFEEDIRTLK
AEKILELLKGEPLHLLAGCPPCQGFSSLRRKNKKRSYKDTRNSLILEYLKMVEELQPITI
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttataatgcaattgatttattctcaggctgtggtggaatgacagaaggtcttata
aacgcaggcatccgggtaatagccgcagttgaaatagataaatttgcatcagaggcatac
cgagccaaccatgataagcacggtgttatattatttgaggaagatattcgcacactcaaa
gcagaaaaaatattggaattattaaagggggagccactgcatctgcttgcaggctgtccc
ccgtgtcaaggattttcatcattaagacgcaaaaataaaaaaagatcgtacaaagataca
cgtaacagcttaattcttgaatatcttaagatggttgaagaattgcagcctataacaatt
tag
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