Dehalobacter sp. DCA: DHBDCA_p2502
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Entry
DHBDCA_p2502 CDS
T02278
Name
(GenBank) diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
Organism
ded
Dehalobacter sp. DCA
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
HisKA_7TM
GAF
GAF_2
GAF_3
Motif
Other DBs
NCBI-ProteinID:
AFV03529
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Position
2544028..2547150
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AA seq
1040 aa
AA seq
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MMKENVVKSRIICLIAIDYFIKNDVNLISAVFPSEKGNMESSHFFSVLFFFSCVMSGSLG
AYTLYLDPKAGLNKAFFALCISLSLWAFGFSICVSAQNQELSLIWRRISVVGWGSFFSIL
LHFSLILTEKKNLLNKWWLYLLLYFPSVLTMYIYGISGSAESKYKLIHTVNGWINVPNSG
FNSFFNYYYIIFCIVSAGMIWLWGRKASAPNSKKKARLILSWIIATLIFASFTDIVASTF
WKMPLPQLAPFIISMSLIVICYAIKKYGLMKPEKIINAEETILNESTRGNIISYMAFAMF
ACGVINFVSFFLFNMTNDLTPVILTSIAILFLGLVILFVKWMPIAENKKDITYFVASVVA
IPIFTLRLIETGSITVWAFPIIFVIIALVFNQRIILVSLGISIISTQILGWFIAPKVNIE
INAQHYLARILFFLVVLGLAFYVNKLYIRRLKENAEQIKLQKLISKISSDFITANQMNLE
QKINQALEECGRFFEMDRAWIYLLDREQHRVTLPFAWYRHDRVIREAIECPGAEDSILMN
QISEGKMIHTKSEICLPIAGNGQILGSFGIDSRRIPKKWREDQIDLLKVIANILGDALTK
VQAEREIKQLAYYDHLTKLPNRVLFQDRVTQAIHQAGRIQKMLAVIFLDLDSFKTVNDTL
GHEGGDELITKVGQKLLECTRKTDTVSRFGGDEFLIMLNNISDYQDVMAVADKIMGLFKE
PAVLRGKEFFVTASAGIALYPIDGQDTETLIINSDIAMYKAKEKGKNQYALCSSEMKEDI
RNKMILKNSLFRALEREELLVYYQPQVHLPEAKIIGMEALLRWKHPELGMVSPAVFIPIA
EQSGIINTIGEWVLKTACRQNKIWQEKGYPPVRMSVNISVNQLRDPNIVEQIANVLQETG
LQPKYLELEITEGSAINEANIIQVLNDFKKLGITISIDDFGTEYSSLNRLKNLPIDRLKM
DMHFVHGIEEDEKDRAITKVIINLAKNLDLEVIAEGVETEKQVQFLSRNMCNEVQGYYFY
RPMPAEEIEELLRKPCANIL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaggaaaatgtagttaaaagtagaataatttgtttaatagccattgattacttt
atcaaaaatgatgtaaatctgatctcagcagtatttccatcagagaagggaaatatggaa
tcatcacattttttttcagttttatttttcttttcttgtgtaatgagcggttctcttggg
gcctatacactttatcttgacccgaaagccggattgaacaaagctttttttgcgctgtgc
atttccttgagtctatgggctttcgggttttccatttgcgtttctgcccagaatcaagaa
cttagcttaatctggcgtaggatctcagtcgttggttggggttcgtttttcagcatcctg
cttcatttcagtttaattctaaccgagaaaaaaaatttgttaaacaaatggtggctatac
ctgctgctttatttcccctcagtcctgacaatgtatatttatgggatctccggttctgcg
gaatcgaagtataagttaattcatacggtcaatggctggattaatgttccgaatagtggc
tttaattcttttttcaattattattatattattttctgcatcgtttccgcaggaatgatt
tggttatgggggagaaaagcttctgcccccaatagtaagaaaaaggcaagactcatccta
tcttggattattgcgactttaatctttgcatcctttacggatattgtcgccagcactttt
tggaaaatgccgcttccccaattggctccttttattatctcgatgtcgctcatcgtcatt
tgctacgcaattaaaaaatacggactgatgaagccggaaaagatcatcaatgctgaagaa
accatcttaaatgaatccacccgcggaaatattatcagctatatggcctttgctatgttt
gcctgcggcgttatcaattttgtttcgttttttctttttaacatgacaaacgatttaacg
cctgtcatattgacaagtattgctattctttttctaggacttgtcattttgttcgtgaag
tggatgcctatagcggaaaataaaaaagatattacttattttgtggcgagtgttgtggcc
attccaatttttactttaaggttaattgaaaccgggagtattacggtttgggcgtttcct
attatttttgtaattatcgccctggtgttcaatcaacgcattatcttagtgtcattggga
atctccatcatatctacccagattctgggctggttcatcgcgccaaaggttaacattgag
ataaatgctcaacactatttggcaagaatcttatttttccttgtcgttcttgggttggct
ttctatgtcaataaactgtacattcgcagactgaaagaaaacgctgagcagataaaactg
cagaaattaatctcgaagatttcttcggatttcatcacagcaaatcaaatgaatctagag
cagaaaatcaatcaggcgcttgaggaatgcggacggttttttgagatggacagggcatgg
atctatctactggacagggagcaacatcgcgttacccttccgtttgcttggtaccggcat
gatcgtgttatcagagaagcgatagaatgcccgggagcggaagactcgatcctcatgaat
cagatatcagagggcaaaatgattcatacaaaatcagaaatttgcctacccattgctggg
aacggtcagatattaggctcattcgggattgattcccgcagaatccctaaaaaatggcgt
gaagaccagattgatttactcaaggtcattgcaaatattttgggagacgctctgacgaaa
gtccaggcggaaagagaaattaaacaattagcctactatgatcatttaacgaagctaccc
aaccgagtgttgttccaggacagggttacgcaagcgatccaccaagccggccggattcaa
aagatgctcgcggtgattttcctggatcttgattctttcaaaacggttaatgatactttg
ggtcatgaaggcggggacgaactgatcactaaagtcgggcagaaattattggaatgcacc
cgcaaaaccgacacggtatcccgttttggcggcgatgaatttctgattatgctgaataat
atttccgactatcaagatgttatggccgttgccgataaaataatgggtttattcaaagaa
ccggcggtattaagaggtaaggaattctttgttacagcaagtgcagggattgcgctatat
cctattgatggacaagatacagaaacgttaattataaactcggatattgcgatgtataag
gccaaagaaaaagggaaaaaccagtatgccctctgttcttccgagatgaaagaggacatt
cggaataaaatgatactgaaaaacagtctgttccgagctttagaacgcgaagaattgtta
gtgtattaccagcctcaggtccatcttccggaagcaaaaatcatcggaatggaagctttg
ttaagatggaagcatccggagttgggaatggtatccccggcagtattcatcccgattgcc
gagcaaagtgggatcattaacacgatcggagaatgggtacttaaaacagcttgccggcaa
aataagatctggcaggaaaaaggatatcctccggtgcggatgtctgttaatatttcggta
aatcaacttcgtgacccgaatattgttgagcagatcgcaaatgtccttcaagaaaccgga
cttcaacccaagtatctggaattagaaattacagaaggttctgcgataaatgaagcaaat
attattcaggttttaaacgattttaagaaattagggattaccatctctatcgacgacttt
ggcacagaatactcctctttaaacaggctgaaaaatttgccgatcgatcgcttgaagatg
gatatgcattttgttcatggtattgaagaagatgaaaaagacagagcaatcaccaaagtt
atcataaatcttgctaaaaatctagacctggaggttattgccgaaggggtggaaaccgag
aaacaagtacaattcttaagtcggaacatgtgcaacgaggttcagggttattatttctac
cgaccaatgcctgctgaggaaatcgaagaattattaagaaaaccatgcgccaatatccta
tag
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