Dehalobacter sp. DCA: DHBDCA_p252
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Entry
DHBDCA_p252 CDS
T02278
Name
(GenBank) Small primase-like proteins (Toprim domain)
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
ded
Dehalobacter sp. DCA
Brite
KEGG Orthology (KO) [BR:
ded00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
DHBDCA_p252
Enzymes [BR:
ded01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
DHBDCA_p252
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Motif
Pfam:
DUF4093
Toprim
Toprim_2
Toprim_4
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
AFV01280
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Position
256978..257601
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AA seq
207 aa
AA seq
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MNFNTNTDLDYEPLIVVEGKNDAHAVRRALGKVDVIWTEGFGLTEQKLEYIAEMAERRGV
IVCTDPDFAGKQIRERINKRIPKARHVYLSVEVARNPKDHDIGLENVSSEEIRKAFSKIL
EVKISNMDSNDGVKIAEKINAEVVVMADLRQSGLVGQCCSAAKRVRLGKILGIGDTNAKQ
FLFRVNRFGITKDEFYSAVKQMEGNGK
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaacacaaatacggatcttgattatgaaccgctaatcgtggtcgaagggaaa
aacgatgcgcatgcggtcagacgcgccttgggcaaagttgacgtcatctggacggagggg
tttggattgaccgagcaaaagctggagtatattgcggagatggcagagagacgcggcgtt
attgtctgtacggatcctgattttgccggaaaacagattcgggagcgaatcaataaacgg
atcccgaaagccaggcacgtttatctttcagtcgaggtagcccgcaatccgaaagatcat
gatattggcctggaaaacgtttcttcggaggagatcaggaaagcgttttccaaaatactc
gaagtaaagatttcgaatatggacagcaacgatggagtgaaaattgctgagaagataaat
gctgaggtggtagtaatggctgatttgcggcaaagtggcctggttgggcaatgctgttcg
gctgcaaaacgggtccggctcgggaaaattttggggattggggataccaacgccaagcaa
tttttatttcgcgtcaaccgttttgggataaccaaagacgaattttattccgcagtaaag
cagatggaagggaatgggaagtaa
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