Dehalobacter sp. DCA: DHBDCA_p312
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Entry
DHBDCA_p312 CDS
T02278
Name
(GenBank) Ribosomal protein S12p Asp88 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ded
Dehalobacter sp. DCA
Brite
KEGG Orthology (KO) [BR:
ded00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ded03009
]
DHBDCA_p312
Enzymes [BR:
ded01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DHBDCA_p312
Ribosome biogenesis [BR:
ded03009
]
Prokaryotic type
ribosomal protein modification factors
DHBDCA_p312
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
AFV01340
LinkDB
All DBs
Position
325794..327119
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AA seq
441 aa
AA seq
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MKKKVAVINLGCPKNQVDSEVITGMLAKGFEITAEPSEADMIVVNTCGFIEDAKAESIDT
LCEMINLKNSGAQKKVYAVGCLAQRYGEELFKEFPELDGVLGDGDLDKIPGVLESSGSER
VYRKKEKQDYLYDNETPRVRFSPSFFAYVKIAEGCDNRCSYCVIPQIKGSYRSRTMESIV
QEVRKLAGEGVKEIALVAQDTTRYGIDLYQAYRLPDLLRELVEIDGIQWIRLMYCYPEAV
SDELIDLIATEPKICNYIDLPLQHADNAILSKMNRRNTAEEAETLIGKLREAVPGIFIRS
TFITGFPGETEEQFQHLLSFVNKMKLDRIGVFAYSQEENTPAANMANQVPPEVREARKNA
VMAAQTEIADQIQQQRVGQIIRVILEEQTAPDEWVGRSEGDAPEIDGQIYLKVQKKHLAG
EIIQTRITEADSYDMGGEELE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaaaaagttgcagtgattaaccttgggtgcccgaagaaccaggttgacagtgaa
gtaataaccggcatgctggcgaaaggcttcgagataacagccgaaccgtctgaagccgat
atgattgttgtaaatacctgcggttttattgaagatgccaaagcagaatcgattgacacc
ctttgtgaaatgatcaatttgaaaaatagcggtgctcagaagaaggtctatgctgtggga
tgtctggctcagcgttatggtgaagagctgtttaaagaatttcctgagcttgatggtgtg
ctcggggacggggatctggataaaatccccggggtcctggaaagctccggcagcgagaga
gtatacaggaaaaaggaaaagcaggactatctttatgacaatgagacgccgagggtccgt
ttcagcccttctttttttgcatatgtcaaaatagccgaaggctgtgataaccgctgcagc
tattgtgtcattccgcagatcaaaggcagctaccgtagcaggacaatggagtcaatcgta
caagaagtaaggaagctcgccggcgagggtgtgaaggaaattgcactggtagcccaggat
acaacccgttacggtattgatctgtatcaggcttaccggctgcccgatcttctacgggaa
ctagtggaaatagacggtatacaatggattcggctgatgtattgttaccctgaggcagta
tctgatgaactgattgacctgattgcgacggaacccaagatatgtaactatatcgatttg
cctcttcaacatgccgataatgccatactttcgaaaatgaaccgcagaaatacagccgaa
gaagcagaaacgctgatcggaaagctccgcgaggctgtaccgggtatctttattcgttca
acgttcattaccggattccctggggaaaccgaagaacagtttcagcatttattgtcattt
gtcaataaaatgaaattagaccgtattggggtttttgcttattcccaggaggaaaatact
cctgctgcgaacatggcgaaccaggtaccgcctgaggttcgggaagctcgcaaaaatgct
gtcatggcagcccaaacggaaatcgcggatcagatccagcagcaaagggtcggacaaatc
atccgggtcattctcgaagaacagactgcccctgatgaatgggtcggacggagcgaaggg
gatgccccggagattgacggtcagatttacctcaaggttcagaagaagcatttggctggt
gaaatcatacagaccagaattacagaagcggatagctatgatatgggaggggaggagctc
gagtga
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