Dehalobacter sp. DCA: DHBDCA_p398
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Entry
DHBDCA_p398 CDS
T02278
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
ded
Dehalobacter sp. DCA
Pathway
ded04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ded00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DHBDCA_p398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ded03016
]
DHBDCA_p398
Enzymes [BR:
ded01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
DHBDCA_p398
Transfer RNA biogenesis [BR:
ded03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
DHBDCA_p398
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
DUF7411
NAD_synthase
Asn_synthase
QueC
Arginosuc_synth
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
AFV01426
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Position
405514..406581
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AA seq
355 aa
AA seq
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MKVAVGMSGGVDSSTAVALLQENGHEVIGVTIVTHEGGLAETAALEAAEQLRIPLHVLDF
RTVFKQEVIDSFAESYYRGETPNPCVLCNRKIKFGELLKQSRGLGADYLATGHYVRKMVD
ETSGRWLIQTGLDAKKDQSYVLYSLSQEQIAHALFPLGDYTKEQVRDLARNRKLTAADSS
ESQEICFIPDDNYAEYIRAAMGKDSEPGDFTDFSGRIIGRHRGLIHYTVGQRKGLGVTFG
KPMFVASIDPVGNRVILGEGNDLYTDILWATGLNWIALERLSGPLKVQAKIRYKANPAAA
VLYPENNLVRVQFETPQRAVTPGQSVVFYDGPTVLGGGVIVSDKCGIRQDLLKAE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgctgttggaatgagtggcggcgtggatagttccaccgccgttgctttactt
caagaaaatggtcatgaggtgatcggagtcaccattgtgacccatgaaggcggacttgct
gaaactgctgcgctggaagcagctgagcagctcaggataccgctgcatgtgcttgatttc
cggacggtttttaaacaggaagtcattgattcttttgcagagagctactacagaggggaa
acgccaaatccgtgtgtgctgtgtaaccggaaaatcaaattcggagaattgctgaaacag
tcgcgcggacttggtgccgactatcttgcgaccggtcattacgttcggaaaatggttgac
gaaacttcaggccgctggctgattcaaaccggactggacgcgaaaaaagaccagagttat
gtgttatactccttaagccaggagcagattgcccatgcacttttcccgcttggtgattat
acgaaagaacaggtcagggacttggcgaggaacagaaaattgacagctgctgacagcagt
gagagtcaggaaatctgttttattcctgacgacaactatgcggaatatattagggcggca
atgggcaaagattctgaaccaggtgatttcacggatttctccggccgcattatcggcaga
cacaggggattgatccattatacggtcggacagcgcaagggattaggggtaacatttggt
aaaccaatgtttgtggcttcgattgacccggttggcaacagggtaatacttggagaagga
aatgatctctataccgatattctctgggcgacaggtctgaactggattgccctggaaagg
ctgtccggccccttgaaggtgcaggcgaagattcgttacaaggcgaatcctgcagcagct
gttctttatcctgaaaataatcttgtcagggttcagtttgagaccccgcagcgggcagtt
actcccggtcagtcggttgtgttctatgacgggccgacggtgttgggaggaggggtcatt
gtatcggataagtgcggaatccgccaagatcttcttaaggcagaataa
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