Dehalobacter sp. DCA: DHBDCA_p483
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Entry
DHBDCA_p483 CDS
T02278
Name
(GenBank) RNA polymerase sporulation specific sigma factor SigF
KO
K03091
RNA polymerase sigma-E/F/G factor
Organism
ded
Dehalobacter sp. DCA
Brite
KEGG Orthology (KO) [BR:
ded00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ded03021
]
DHBDCA_p483
Transcription machinery [BR:
ded03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DHBDCA_p483
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_3
HTH_16
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AFV01511
LinkDB
All DBs
Position
complement(477525..478307)
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AA seq
260 aa
AA seq
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MIQRLSDMNLPRFPLLSDQELMELLHKAQNGDIDARERLVNCNLKLIFNMIQRFSHRGYD
LEDLFQIGTIGLIKAIDKFDFSYGVKFSTYAVPMIIGEIRRFLRDDHPIKVPRSYKELVY
KINRSREKLSSELNREPTLNEIAEDIGTPSEDIILAIEAVQSPSSIHDTLYQDDSDPIYV
IDQIPLEKDTDPGWFEKIALQEVLDKLPGREKEVLYQRFFEDRTQNEIAKVMNLSQVQIS
RIERAALLHLKQILNDSPYE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgattcaacgactttcagatatgaacctgccccgttttcccctgctctccgaccaagaa
ttgatggagcttttacacaaagcccaaaatggcgacatcgatgcccgggagcgtttggtc
aattgtaatctgaagctcatttttaatatgatccagcgtttttcccacaggggatatgat
ctggaggatctctttcagattggcaccattggtctcatcaaagccatcgataaatttgat
ttctcgtacggtgttaaattttccacgtacgccgtaccgatgatcattggagaaatccga
agatttttgagagatgaccatcctattaaagtcccacgttcttataaagagctggtttac
aaaatcaaccgttcccgggaaaagctttcctcggaattaaatagagaacccacgctgaac
gagattgccgaagatatcggcaccccgagcgaagatatcatactcgccatcgaagcagtg
caaagcccgtcgtcgatacatgatacgctttatcaggacgattctgatcctatttatgtt
attgatcaaattccgctggagaaggataccgatccgggatggtttgaaaaaattgccctg
caggaagttctcgataaactgcccggaagggaaaaagaggttctgtatcagcgattcttt
gaggacagaacgcaaaatgaaattgctaaagtcatgaacctctcccaagtccagatttcc
aggatcgaacgcgcggccttactccatttaaagcagattctgaacgacagtccttacgag
tag
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