Dehalobacter sp. DCA: DHBDCA_p5
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Entry
DHBDCA_p5 CDS
T02278
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ded
Dehalobacter sp. DCA
Brite
KEGG Orthology (KO) [BR:
ded00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ded03032
]
DHBDCA_p5 (gyrB)
03400 DNA repair and recombination proteins [BR:
ded03400
]
DHBDCA_p5 (gyrB)
Enzymes [BR:
ded01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DHBDCA_p5 (gyrB)
DNA replication proteins [BR:
ded03032
]
Prokaryotic type
DNA Topoisomerases
DHBDCA_p5 (gyrB)
DNA repair and recombination proteins [BR:
ded03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DHBDCA_p5 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
AFV01033
LinkDB
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Position
4268..6202
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AA seq
644 aa
AA seq
DB search
MQNESELANQINPGSDYNAGQIEVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSID
EAMAGYCDEIEVIIHQGESITVQDNGRGIPVDMHAKMQKPAVEVALTVLHAGGKFNNEAY
KVSGGLHGVGMSVVNALSVNLRVEIKKDGKKYSQEYSRGKTLTELKEIGTYQGRSGTMIT
FQPDPEIFEDIVYDYEVLAHRLKELSFLNKNVMITLIDERNEAKDVYNHNNGLIDFVEYL
NKNKDPIHQKAIVFETEKDNTKVEIALQYNESYTETLFSYANNINTTEGGTHEAGFKAAL
TRVVNDYARKNNILKGNENNLSGEDVREGLTAIISVKIMEPQFEGQTKTKLGNSEVRSIV
DSVVGEGLTTFFEENPAVAKKIVEKGLQATRARLAARKARDLTRRKSALESTSLPGKLAD
CTWKDPRYCEMYIVEGDSAGGSAKQGRNQKFQAILPLRGKILNVEKARLDRILGNTEIRA
MITALGTGISEEFDIEKARYHKVVIMTDADVDGAHIRILLLTFFYRYMKPLIENHYVYIA
QPPLFKVKNGKQIQYAYSDKELSKVMETVGRDKTEIQRYKGLGEMNPEQLWETTMDPESR
TILQVQMDDAMRADELFTMLMGDKVEPRKEFIQKHARDVRNLDI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaatgaatcggaattagcaaatcaaataaatcccggatctgattataatgccggc
cagatagaagtactcgaaggattagaagctgttcgaaaacgccccggtatgtacatcggt
tccaccagcagccgtggtttgcaccatctggtttatgagatcgttgacaatagcatcgat
gaggctatggctggttactgcgatgaaatagaagttattattcatcagggagagagtatt
actgttcaagataatggccgcggcataccggttgatatgcatgcaaagatgcaaaagccg
gcagtggaagttgccttgacagtattgcatgccggcggaaaatttaataacgaggcttat
aaggtttctggtggcctgcacggggtcggcatgagcgttgttaatgcgctttccgttaat
ttgcgtgtcgagatcaaaaaagatgggaaaaagtacagccaggaatattcccgcggcaaa
acactgacggaactcaaggaaatcggtacgtaccaaggaagatccgggacaatgattact
ttccagcctgatccggaaatcttcgaagatatcgtttatgactatgaagttctggcgcat
cgtttgaaggagctttcatttctgaataaaaatgtcatgattactctgattgacgagcgg
aacgaggccaaagatgtctataatcacaataatgggctgattgattttgtagaatattta
aataaaaataaagatccgattcatcagaaagcgattgtatttgagacggagaaagataat
acaaaggttgagatcgcccttcaatataacgaaagttataccgaaaccttgttttcgtat
gctaataatatcaataccacagaaggcgggacgcacgaagcgggatttaaagcggccctg
accagagttgttaatgactacgcgcgtaaaaacaatattttaaaaggcaatgagaataac
ttaagcggtgaggatgtcagagaaggccttacagccattatttcggttaagatcatggaa
cctcagtttgaaggacagacaaagaccaagctgggtaacagtgaagttagatccattgtc
gacagcgtggttggtgaaggtttaacgactttttttgaagaaaatccagccgttgccaaa
aagattgttgaaaaaggcttgcaggctacccgggcaaggcttgccgcccgtaaggccaga
gatcttacccgcagaaaaagtgcattggaaagtacttctttgccgggtaaactggccgac
tgcacctggaaagatccaagatactgtgaaatgtacattgtcgaaggagacagcgctggc
ggctcagctaaacaaggaagaaatcaaaaattccaggcgattctgccgttgcgtggaaaa
attctgaacgtcgaaaaagcccgcttggacaggatcctgggaaatacagaaataagagca
atgattacagcgcttggtaccggaatatctgaagagtttgatattgaaaaagcccgttat
cataaagttgtgattatgacagatgctgatgtcgacggtgcacatatccggattctctta
ctgacatttttttacaggtatatgaaaccgctgattgaaaatcattatgtttatattgcg
cagccaccgctttttaaggttaaaaacggcaaacaaattcaatatgcttatagtgataaa
gaattaagtaaggttatggaaactgtcggtagagataagacagaaatccaacgctataaa
ggtcttggtgaaatgaatcccgaacagctttgggagacaacgatggatcctgaatcccgg
accatacttcaggtccaaatggatgatgccatgagagcagatgagctattcacgatgctg
atgggtgacaaagtagagccccgtaaggaatttattcaaaaacatgccagggatgtacga
aatctggatatttaa
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