Dehalobacter sp. DCA: DHBDCA_p626
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Entry
DHBDCA_p626 CDS
T02278
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ded
Dehalobacter sp. DCA
Brite
KEGG Orthology (KO) [BR:
ded00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ded03016
]
DHBDCA_p626
Enzymes [BR:
ded01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DHBDCA_p626
Transfer RNA biogenesis [BR:
ded03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DHBDCA_p626
Prokaryotic type
DHBDCA_p626
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Acid_PPase
DUF2344
Hemocyanin_N
Motif
Other DBs
NCBI-ProteinID:
AFV01655
LinkDB
All DBs
Position
complement(629972..630691)
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AA seq
239 aa
AA seq
DB search
MTIAYDGTKYKGWQKQKDTDLTIQGKIETVLAKMAEEKIQVIGCGRTDAGVHAENYIANF
HTTSTFKTKKILAYLYEFLPEDIVVKSMEEVSERFHARYNVKAKTYVYTINNNKFRDVFN
RKYTYHLADKLDLEQMRTAAELLIGTHDFQSFTNERSAKSTVKTINSILINENKGLIKIE
FNGNSFLWNMLRIIVGTLLEVGKGTLQPNDVEKILQEKKRWEARPLAQAKGLCLVDVQY
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcgcctatgatgggaccaaatataaaggttggcaaaaacaaaaagataccgat
ctgacgattcaaggtaaaattgaaactgtcttagcaaaaatggcagaggagaagattcag
gttatcggctgtggaaggacagatgccggggtacacgccgaaaattacattgctaatttc
catacaacatctaccttcaagaccaagaagatcttagcctatttgtatgaatttttaccg
gaagatattgttgtaaaatcaatggaagaagtatctgaaagatttcatgccagatataac
gtcaaagcaaaaacgtatgtttataccatcaataataataaattcagggatgtatttaac
agaaaatatacctatcacttagcggataagctggatctggaacaaatgaggactgctgcc
gaactgctcattggaacgcatgattttcagagctttacaaatgagcgcagtgctaaatcc
actgttaaaacgatcaattctattttgattaacgaaaataaaggccttattaaaattgaa
tttaacggtaatagctttctatggaatatgctaagaattatcgttggaacgctgctcgaa
gtaggaaaaggcacgctgcagccgaacgatgtcgaaaaaatcttacaggaaaagaaacgt
tgggaagcacggcccttggctcaagccaaaggtttatgcttagtcgatgtacagtactaa
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