Dehalobacter sp. DCA: DHBDCA_p875
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Entry
DHBDCA_p875 CDS
T02278
Symbol
hymB
Name
(GenBank) putative iron-only hydrogenase, electron-transferring subunit HymB
KO
K00335
NADH-quinone oxidoreductase subunit F [EC:
7.1.1.2
]
Organism
ded
Dehalobacter sp. DCA
Pathway
ded00190
Oxidative phosphorylation
ded01100
Metabolic pathways
Module
ded_M00144
NADH:quinone oxidoreductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ded00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
DHBDCA_p875 (hymB)
Enzymes [BR:
ded01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.2 NADH:ubiquinone reductase (H+-translocating)
DHBDCA_p875 (hymB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Complex1_51K
NADH_4Fe-4S
Pyr_redox_2
Fer4_20
Pyr_redox_3
NAD_binding_8
2Fe-2S_thioredx
Pyr_redox
DAO
Thi4
Suc_Fer-like
SLBB
Amino_oxidase
FAD_oxidored
AlaDh_PNT_C
HI0933_like
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AFV01902
LinkDB
All DBs
Position
complement(918963..922049)
Genome browser
AA seq
1028 aa
AA seq
DB search
MKVNSVADLDQIKKEYSEKLSKYNYQILVCGGAGCVSSNCGEVSAALVKYLEEYELQDKV
AVSETGCMGTCAVGPVLLILPDETFYTDVNPEKMAEIVKSHIINGTVLEKYTFYDQTLGK
HVPNIKDIGFFKDQVKIALRNCGQIEYASIDAYIAKDGYYAIAKAVGGMKQQDVVDEVKK
SGIRGRGGAGFPTGIKWEAGMKSTSDQKFMVCNADEGDPGAFMDRSVIEGDPHSVIEGMM
LGGYAIGASMGYVYIRAEYPIAVERLGAAIEEARECGLLGAKLFGSDFEFNLEIRIGAGA
FVCGEETSLMASIEGKRGEPKQKPPFPFERGLFGKPTIINNVETLACIPPIILKGSHWYS
QFGTEKSKGTKVFALAGDIVNTGIVEVPMGMSLGNILFNIGGGIPGGKNFKAAQAGGPSG
GCITKEYLNTPMDYENISKIGAIMGSGGLVVMNEDTCMVDTARYFMDFIQDESCGKCVPC
RVGTKRMLEILERITKGEGQEGDIELLEELGAQIKETAMCGLGQTAPNPVLSTIRYFRDE
YEEHIKNKYCRAGVCSDLFLSPCENACPASVNVPGYMGLISAGRYIDAYNLIRQENPFPA
ICGRICTHPCESKCRRAQLDEAISISDLKRFVADYAFKHEEESTKDIVFPKNGKSVGIIG
AGPSGLTCGYYLARLGYEVDVYEAAPVAGGLLAFGIPEYRLPKDVLKHEIKLIEQVGVKI
HLNTEVGNDVSFAGLRKKHHSIYIATGTQLSNKINIPGEDLEGVVHGLNFLRNVNLGQDV
KIGETVAIIGGGNTAIDAARTALRLGAKKVNVLYRRTIQDMPADAREICDMIEEGIEIIP
LVAPTRFIGKDKIEAIECVRMKVSGFDSAGRRKPKIEEGSNFTLKVDMVIPAVSQSSDLP
FVGMDDVELTEWGTFITDKDTLMTTMDGVFAGGDVARGSDVAITAIADGKKAASSIDLYL
GGKGVLNKGEKIEIPAPADQDELVEHARFPMEVLDPEKRKDCFCEVAQGYHKLNAIAESM
RCLRCDRR
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcaatagtgttgctgatttggatcaaattaaaaaggaatacagtgaaaaactg
tccaagtataattatcaaatccttgtatgcggaggcgcaggttgtgtatcctccaactgc
ggtgaagtatccgctgcgcttgtgaaatatctggaagaatacgagcttcaggacaaggtt
gcagttagtgaaacaggctgtatggggacttgtgcggtcggtcctgtccttcttattcta
cctgatgaaactttttatacggatgttaatcccgaaaaaatggccgagatcgtaaaatct
cacattatcaacggtacggtgctggaaaagtatacattctacgatcagacgcttggcaaa
cacgttccaaatattaaggatattggttttttcaaagaccaggtcaaaattgcgctcaga
aactgcggtcagatcgaatacgcttcgattgacgcttatatagccaaagacggttattat
gcgattgccaaagctgtgggtggcatgaagcagcaggatgttgtcgatgaagttaaaaag
tccggcatcagaggccgcggcggtgcaggtttcccgacaggcatcaaatgggaagctgga
atgaaatcaacgagcgatcagaaattcatggtctgcaatgctgacgaaggagaccctggt
gcgttcatggacagaagcgtcatcgaaggtgacccgcacagtgtcattgaagggatgatg
ctcggtggttatgcgattggtgcaagcatgggctatgtttatatccgggcggagtatccg
attgccgttgaacgtctgggtgccgcgattgaagaagcccgcgagtgcggcctgctcgga
gcgaaactgtttggttcggattttgagtttaacctggaaatccggattggtgcaggcgct
tttgtctgcggtgaagaaacatctttgatggcttcgatcgaaggcaaacgcggagaaccc
aaacaaaaaccaccgttcccattcgaacgcggcttgtttggcaaaccgaccattatcaac
aacgtagaaaccttagcatgcattcctccgatcattctgaagggttcgcactggtattcg
cagtttggcactgaaaagagcaaaggcaccaaggtcttcgcactggccggagatatcgtc
aataccggtatcgtcgaagtcccgatgggcatgagccttggcaatattttgttcaatatt
ggcgggggcattcccggaggtaaaaacttcaaggctgcccaggccggaggcccttccggc
ggctgtatcacgaaggaatatctgaatacgccgatggattatgaaaatatcagcaaaatc
ggtgccattatgggatccggcggactggtcgtcatgaatgaggatacctgtatggtcgat
accgccaggtacttcatggatttcatccaggatgaatcctgcggaaaatgcgttccttgc
cgtgtgggaaccaagagaatgctcgagatcctggaacgcattaccaagggagaaggccag
gaaggcgatatcgaacttctcgaagagctcggcgctcagatcaaagaaaccgcaatgtgc
ggtttgggtcagacggctcccaatccggtcttaagcaccatccggtatttccgtgacgaa
tacgaagagcatatcaagaacaaatactgccgcgccggcgtatgttcggatttattcctt
tcgccgtgtgagaatgcctgcccggcaagcgtcaatgtacccggatatatgggcttgatc
tcggcaggaagatatatcgatgcttacaaccttatcagacaggaaaatccgtttccggct
atttgcggaagaatttgcacgcatccgtgcgaaagcaaatgccgcagggcacagctggac
gaagcgatctcgatttccgatctgaaacggttcgtggcggattatgcgttcaagcatgaa
gaagaatccacgaaagacattgtctttccgaaaaacggcaagagcgtcggcattattggc
gcaggtccttcaggcttgacttgcggctattacctggcaagacttggctatgaggtcgat
gtttatgaagcagcgcctgtggccggaggcctacttgcatttggtattccggaatacagg
ctgcccaaagacgtgcttaagcatgaaatcaaactgattgagcaagtcggtgtcaagatc
catctgaataccgaagtaggcaatgacgtcagcttcgccgggctgcgcaaaaaacatcat
tccatttatattgcaacaggaacccagctgtccaacaagatcaatatcccgggcgaagac
ctcgagggggtcgttcacggcttgaatttcctgcgcaatgtgaacctcggacaggatgtg
aagatcggtgaaaccgtggcgattatcggtggcggcaatactgcgattgatgcagctaga
acggctttaaggttaggcgctaagaaagtcaatgttttgtatagaagaacgattcaagat
atgcctgctgatgccagagaaatctgcgatatgattgaagaaggcattgagattattccg
ctggttgccccgacccgttttattggcaaagacaaaatcgaagcaattgaatgcgtcaga
atgaaggtgagcggctttgattctgccggcagaagaaaaccaaaaattgaagaaggatcc
aatttcaccctgaaggtcgatatggtcatcccggcggtcagccagtcttcggatctgccg
tttgtcggaatggatgatgttgaactaacagagtggggaacttttattacggataaagac
accttgatgaccacgatggatggcgtatttgccggcggtgacgttgccagaggttccgat
gtggccatcacggcaattgcagacggtaagaaagctgcatcttccattgacctctacctg
ggtggcaaaggcgtgctgaataaaggcgaaaagatcgaaattcctgcgccggcagatcag
gacgaactcgttgagcatgccagattcccaatggaagttcttgaccctgagaagagaaaa
gactgcttctgcgaggtggctcaagggtaccacaagctcaatgcaattgcagaatctatg
cgctgtttacgctgtgacaggaggtag
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