Deefgea piscis: HQN60_00615
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Entry
HQN60_00615 CDS
T06622
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
dee
Deefgea piscis
Pathway
dee00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dee00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HQN60_00615 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dee01007
]
HQN60_00615 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dee03016
]
HQN60_00615 (aspS)
03029 Mitochondrial biogenesis [BR:
dee03029
]
HQN60_00615 (aspS)
Enzymes [BR:
dee01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HQN60_00615 (aspS)
Amino acid related enzymes [BR:
dee01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HQN60_00615 (aspS)
Transfer RNA biogenesis [BR:
dee03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HQN60_00615 (aspS)
Prokaryotic type
Other AARSs
HQN60_00615 (aspS)
Mitochondrial biogenesis [BR:
dee03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HQN60_00615 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
DUF7006
Motif
Other DBs
NCBI-ProteinID:
QKJ65362
UniProt:
A0A6M8SJW5
LinkDB
All DBs
Position
complement(113611..115416)
Genome browser
AA seq
601 aa
AA seq
DB search
MRTDYCGLIDGRYLGQTVTIKGWAHRRRDHGGVIFIDLRDREGLVQVVFDPDIPEAFAIA
DATRNEYVLEITGEVRARPEGTTNAKMITGQIEILAKSITVLNQAATPPFQIDDENLSEN
VRLTNRVIDLRRPVMQKNMRLRYRVAMLIRNYLDGLGFIDIETPMLTRSTPEGARDYLVP
SRVHDGQFFALPQSPQLFKQLLMVAGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFL
NEDEIMDITESMAKHVFKEAIGVELGDFPRMAYDDAMRLYGSDKPDLRVSLQFTELTDLM
KTEEFKVFRGAADMENGRVVGLRIPGGASISRKEIDDYTKFVAIYGAKGLAYIKVNDVTN
LSNGEGSGLQSPIVKNLSEACLQEIITRTGATTGDLIFFGADKEKVVNEAIGALRLKVGH
EKGEAAGYFTRGWKPLWVVDFPMFERDDDAGRWNACHHPFTSPKVEHIEFLKSDPGKCKA
RAYDMVLNGWEMGGGSVRIHRADMQSTVFEALGIGEEEAQNKFGFLLDNLQFGAPPHGGL
AFGLDRLVTLMTGAESIRDVIAFPKTQRAQCLLTNAPNEVDEKQLRELHIRLRNTQQANL
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccgattattgcggtttgattgatggtcgttatctgggccaaactgtcacgatt
aagggctgggcccatcgtcgtcgtgaccatggtggtgtgatttttatcgatttgcgcgac
cgtgaaggtttggtgcaagtggtatttgatccagatatcccagaagcttttgcgattgcc
gatgcaacacgcaatgaatacgtattggaaatcaccggtgaagtgcgggcgcgtcctgaa
ggcacgaccaacgctaaaatgatcaccggccaaatcgaaattttggccaaaagcattacc
gttcttaatcaagcggcaacgccaccgttccagatcgacgatgaaaatctctctgaaaac
gtgcgtttaaccaaccgcgtgatcgatttgcgtcgcccagtaatgcaaaaaaacatgcgt
ttgcgttaccgcgtagcgatgttaatccgtaactaccttgatggtttgggctttatcgat
atcgaaacgccgatgttgacacgctcaaccccagaaggcgcgcgcgattacttggtacca
agccgcgtgcacgatggtcaattctttgccttgccgcaatcgccacaattgttcaaacaa
ttgttgatggtggccggtttcgatcgctactaccaaatcgttaaatgcttccgcgatgaa
gatttgcgcgctgatcgtcagcctgaattcacccagattgatatcgaaacttcgttcttg
aacgaagacgaaatcatggacatcaccgaatcaatggccaaacacgtatttaaagaagcc
atcggcgttgaattgggcgacttcccacgtatggcgtatgacgacgcaatgcgtttgtac
ggctcagacaagcctgatttgcgcgtgtcgttgcagttcactgaactgactgacttgatg
aaaaccgaagaattcaaagtcttccgtggcgctgctgacatggaaaacggccgcgtagtc
ggcttgcggattccaggtggcgcgagcatcagccgtaaagaaatcgacgattacaccaag
tttgtagcgatctacggtgcgaaaggcttggcatacatcaaagtcaacgacgttaccaat
ctgagcaacggcgaaggctctggcttgcaatcgccaatcgttaaaaacttgagcgaagct
tgcttgcaagaaatcatcacccgcactggtgcaaccaccggcgatttgattttctttggc
gcagacaaagaaaaagtagtgaacgaagccatcggcgcattgcgcttgaaagtcggccac
gaaaaaggcgaagcagcgggttacttcactcgcggctggaaaccattgtgggtggttgac
ttcccaatgttcgaacgtgacgacgacgcaggccgctggaatgcttgccaccatccgttc
actagcccgaaagttgagcacatcgagttccttaaatctgatccgggcaaatgcaaagcc
cgcgcttacgatatggtcctcaacggttgggaaatgggcggcggttcagtgcgtatccac
cgcgctgatatgcaatcaactgtatttgaagcactcggtattggcgaagaagaagcgcaa
aacaaattcggcttcttgctcgacaatctacaattcggtgcccctccgcacggcggctta
gcctttggtttggatcgtttggtaacattgatgaccggcgccgaatccatccgtgacgtg
attgccttcccgaaaacgcaacgtgcgcagtgcttgttaaccaatgcaccgaacgaagtg
gacgagaaacaactccgcgaattgcacattcgtttgcgtaacactcagcaagccaattta
gcgtaa
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