Deefgea piscis: HQN60_00720
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Entry
HQN60_00720 CDS
T06622
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dee
Deefgea piscis
Pathway
dee03030
DNA replication
dee03430
Mismatch repair
dee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HQN60_00720 (dnaE)
03430 Mismatch repair
HQN60_00720 (dnaE)
03440 Homologous recombination
HQN60_00720 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dee03032
]
HQN60_00720 (dnaE)
03400 DNA repair and recombination proteins [BR:
dee03400
]
HQN60_00720 (dnaE)
Enzymes [BR:
dee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HQN60_00720 (dnaE)
DNA replication proteins [BR:
dee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HQN60_00720 (dnaE)
DNA repair and recombination proteins [BR:
dee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HQN60_00720 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
tRNA_anti_2
DUF7398
DUF3173
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
QKJ65382
UniProt:
A0A6M8SJY5
LinkDB
All DBs
Position
138428..141871
Genome browser
AA seq
1147 aa
AA seq
DB search
MNAPAYIHLRLHSEFSVSDGIVRLDDAVKRAKADKMPALGMSDLMNLFGLVKHYKACRNA
GIKPIIGLDAWIENPDNRDKPFRTLLICKNRAGYGRLCELITMAFRDNQYRGRGELKKEW
FTAGDNSGLIALSGAELGEVGQQFLANNPELASAAAQWWAAQFPDSFYLEIQRTGTAACE
TSLQRQLDLAGELNLPVVATHPIQFMDPDDFKAHEARTCISAGFVMNDKRRPKDFTEEQY
FKTTAQMQELFADVPEALANTVTIAQRCNIEIVLGKNVLPPFPTPEGMTLDDFLVYEAKR
GLEMRLAQLYPDEALREAERPRYYERLKIETDTIINMGFPGYFLIVADFIAWGKVNGCPV
GPGRGSGAGSLVAYSLGITDIDPTAYALLFERFLNPERVSMPDFDIDFCQENRWRVIEYV
REKYGADAVSQIATFGTMAAKAVVRDVGRVLDLPYMFCDGVSKLIPAAPGKQYSLDDALE
MVPELAERVEREEELKELWELAKKLEGLTRNIGMHAGGVLIAPNKITDFCPVYQASGDDA
SPVSMLDKDDVEAVGLVKFDFLGLRNLTIIELALQYIKNQTGEYLDLMSLGFNDQAAYQV
FRDANTTGVFQVESDGMKRLLEKLAPDRFEDIIAVLALYRPGPLGSGMVDTFINRKKGLE
APDYFHPDLEKCLEPTYGVIVYQEQVMQISQIIGGYTLGGADMLRRAMGKKKPEEMAKHR
ETIAEGAAKQGYDPKLAETLFDLMTKFAEYGFNKSHTAAYAVVSYHTAWLKAHHTAAFMA
ATMSSELDNTDQLKVFYDDCLNKKNKLEILPPDINESFYRFVPVGKKQIRYALGAIKGVG
ESAVNMIVAERTANGPFKDIYDLCSRTDKKEVNKRVLEALIRGGAFDALEPNRARIMANV
EQAMAVAEAEIANANQISLFDMLEPAAAPQIEHLDAPLWDDKIKLAEEKSALGFYLSGHP
FDAHARPIKGLIRTRLDRLNNQREPQFIAGIVAGMRIKNGDRGRMCFLQLDDGHAKVELT
LYSESFEANRTKLKEDTLLVIEAKVSEDRFSGGQRIIADRVFDLAEARSHFARALKINLG
QQGDADRLKQILQPHAADHGCAVEIDYQNNDAQCQMLLGHAWRVILRDELLSDLRNWLGP
QSAEPRF
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacctgcctatatccatcttcgcctccattccgagttttcagtttctgacggc
atcgtccgtctggatgacgccgttaaacgcgccaaagccgacaaaatgccggcgcttggc
atgtcggatttaatgaatctgtttggtctggttaagcattacaaagcttgccgcaatgcc
gggattaaaccgattatcggcttggatgcatggatcgaaaatccagataaccgcgacaaa
ccatttcgcacgctgctgatttgtaaaaatcgcgccggttatggccgtctgtgcgagctg
atcacgatggcgtttcgcgacaatcaatatcgcggccggggcgaactgaaaaaagaatgg
tttaccgccggtgataatagcggtttgattgcgctgtcgggcgctgagctcggcgaagtt
ggtcagcagtttttggcgaataatccagagcttgccagcgcggcagcccagtggtgggcg
gcgcaatttcccgatagtttttacctcgagattcaacgcaccggcaccgcagcatgcgaa
accagcttgcagcgccagctcgatttggcgggtgagctcaatctgccggtagtcgcaacg
cacccaatccaatttatggatccggacgactttaaagcgcacgaagcgcgcacctgtatt
tcggcaggctttgtcatgaatgacaaacgtcgcccgaaggatttcaccgaagagcaatat
ttcaaaaccacggcgcaaatgcaagaattgtttgccgatgtgcccgaagcgctcgccaat
accgtgacaattgcacagcgctgcaatattgagattgtgctgggtaaaaacgtcttaccg
cccttccctacgcccgaaggcatgacgctggatgatttcttggtgtatgaggctaagcgc
ggcttagaaatgcgccttgcacagctataccccgatgaggcactgcgcgaagcggaacgt
cctcgctattacgaacgactcaaaatcgaaaccgacaccattattaatatgggctttccc
ggttactttttgatcgttgccgactttatcgcctggggcaaagtcaacggctgcccagtg
gggccgggtcgtggttcgggtgccggctcgttggtggcgtacagcctgggtattaccgac
attgatcccactgcgtatgcactgctgtttgagcgctttttgaatccagaacgcgtttca
atgcccgactttgatatcgacttctgccaagaaaaccgctggcgcgtgattgaatacgtg
cgtgaaaaatacggcgcggatgccgtgagccagattgcgacttttggtaccatggccgcc
aaagcggtggtgcgcgacgtcggccgcgtgctcgatttgccgtatatgttttgtgatggc
gtatccaaactcatccctgctgcgcccggtaaacaatatagtctggacgatgcgctagaa
atggtgcctgagctggccgagcgcgttgagcgcgaagaagaactcaaagagctatgggag
ctggccaaaaaactcgaaggcctcacgcgcaatatcggtatgcatgccggtggggtattg
attgcaccaaataaaatcactgatttctgcccggtgtaccaagcatcaggcgatgatgcc
tcgccggtgtcgatgctggataaagacgacgttgaagccgttggcttggtgaagtttgac
tttttgggtttgcgaaatctaacgattatcgaactcgcgctgcaatacatcaaaaaccaa
actggcgaatatctggacttaatgagtctgggctttaacgatcaagccgcgtatcaggtg
ttccgcgatgccaataccaccggcgtgtttcaggtcgaatcggacggtatgaagcgcttg
ctcgaaaagctcgcgcccgatcgttttgaggacattattgcggtattggcgctatatcgt
ccggggccactcggctcagggatggtcgacacctttattaatcgtaaaaaaggtcttgaa
gcgcccgattacttccatcccgacctcgaaaaatgtttggagccgacttacggcgttatc
gtgtatcaagagcaggtgatgcagatttcgcagattatcggtggctacacgctcggtggc
gccgatatgctgcgccgggcgatgggtaagaaaaagcctgaagaaatggccaaacaccgg
gaaaccattgccgaaggtgccgccaagcaagggtacgatcccaaactcgccgaaaccttg
tttgacttgatgaccaagtttgccgagtacggctttaataaatcgcataccgcagcgtac
gcggtggtgtcgtaccacaccgcctggctcaaagcgcaccatactgcggcctttatggcg
gcaacgatgtcgtccgagttggacaatactgaccagctcaaagtgttttacgatgattgt
ttaaacaaaaaaaacaaactcgaaatcttaccgcccgatattaacgaaagtttttatcgc
tttgttccggtgggtaaaaaacaaattcgttatgccttaggggcgattaaaggcgttggc
gaaagcgcagtgaatatgattgtcgccgagcgcacggccaacggaccgtttaaagacatt
tacgatttatgtagccgaaccgacaaaaaagaagtcaataaacgcgtgctcgaagcctta
attcgtggtggcgcttttgatgcgcttgagcctaatcgcgcgcgcattatggccaatgtc
gagcaagccatggccgtggccgaagctgaaatcgccaatgccaatcaaattagcttgttc
gacatgctagagcccgctgccgcaccgcaaatcgaacacctagatgcgccgctatgggat
gacaaaatcaaactggccgaagaaaaatccgcactcggattttatctttctggccacccg
tttgatgcccatgccagaccgattaaaggcttgattcgcacccgacttgatcgactcaat
aaccagcgcgagccgcaatttattgccgggattgtggcgggcatgcgaattaaaaatggt
gatcgtggccggatgtgttttttacagctcgatgatggtcatgccaaagttgaactcacg
ctgtattccgaatcgtttgaagccaatcgcaccaagctcaaagaagacactttattagtc
atcgaagcaaaggtctcggaagatcgcttttccggtgggcaacgcattatcgccgatcgg
gtatttgacttagccgaagcgcgcagccactttgcgcgggcactcaaaattaacttgggg
cagcaaggcgacgccgacaggctcaagcaaattttgcaaccccacgcggccgatcacggc
tgcgcggttgaaattgattaccaaaataacgacgcgcaatgccagatgctactaggccat
gcgtggcgagtgattttacgtgatgaattgctgagcgatttgcgtaactggcttggtcca
caatcggctgaaccacgcttctag
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