Deefgea piscis: HQN60_03495
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Entry
HQN60_03495 CDS
T06622
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dee
Deefgea piscis
Pathway
dee03030
DNA replication
dee03430
Mismatch repair
dee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HQN60_03495
03430 Mismatch repair
HQN60_03495
03440 Homologous recombination
HQN60_03495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dee03032
]
HQN60_03495
03400 DNA repair and recombination proteins [BR:
dee03400
]
HQN60_03495
Enzymes [BR:
dee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HQN60_03495
DNA replication proteins [BR:
dee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HQN60_03495
DNA repair and recombination proteins [BR:
dee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HQN60_03495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Ig_NUP210_4th
Motif
Other DBs
NCBI-ProteinID:
QKJ65866
UniProt:
A0A6M8SRD8
LinkDB
All DBs
Position
complement(730359..731798)
Genome browser
AA seq
479 aa
AA seq
DB search
MTHPFYPAPLVLLDLETTGANPSTDRITEIGLIQVDLSGICSWSSLVNPCQAIPPFIQRL
TGIDDAMVANAPVFADVADEVLDQLQNRIFVAHNARFDYTFLRNEFKRCGRAFRGQVLCT
VQLSRKLYPDEYKHSLDALIARHGLQYSGERHRALTDAQLIYQFLQAAVQDLGAERVTAA
INELIRPPALPSQIPESVIDDLPDTAGVYVFYGEQDEALWVGSSMNLRRRVLQHFGKKAN
EGPAAYLARDLRRITWFETAGELGNTLLERQLIQTLRPRMNSSVRHKVDQTQSLWQIELP
KAVRGEAILPLQPQLIALTALSQASGELFGPFRGAREAQNIMNRIIKAQGLCRQALGLEA
AKKDGSPCQAHLQGDCRGACIGREPMGLHNGRLLAALAKHQLAAWPYAGAVAIAEGPEWS
TVWHVLDHWCYLGSIDHPDQLSALLAAERPAFDVDMAKLIRTELKKTKTIVLDCATLAG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatccgttttatccagcgccgctggtgttgcttgatttggaaacaacgggtgcc
aacccttcgacggatcgaattactgaaatcggtttaattcaagtggatttgtcgggtatt
tgctcttggagctcattggttaatccttgccaagcaatacccccatttattcagcgactg
accggtattgatgatgcgatggttgcgaatgcaccggtgtttgcagatgtcgctgatgag
gttcttgatcagctacaaaatcgaatttttgtcgcacacaatgcacgatttgattacacc
tttttacgcaatgaatttaagcgttgtgggcgggcatttcgtggtcaagtgctatgcacg
gtgcaactctcgcgcaaactttacccagacgaatacaagcacagtttggatgccttaatt
gcccgccatggtttgcaatatagcggcgagcggcatcgtgctttgaccgatgcacagctg
atttatcaatttttgcaagcggcggtgcaggatttaggagcggagcgtgtcaccgctgcc
attaatgaattgattcggcctccggcgctaccgagtcaaatccccgaatcggtcatcgac
gatctacccgatactgctggcgtctatgttttttatggtgagcaagacgaggccctatgg
gtgggcagcagtatgaatctccgtcgtcgggtcttgcagcattttggcaaaaaagccaat
gaaggcccagcagcctatctggcgcgtgatctgcgtcgaattacttggtttgaaacggcc
ggtgagctaggcaataccttgcttgagcgacaactgattcaaaccttgcgaccaagaatg
aattcatcagtacggcacaaagtagatcaaactcagtcgctatggcagattgagttgccc
aaggcagtgcgtggcgaagccatattgccgttgcaacctcaattgattgctttgacggca
ttaagtcaagccagcggagaattgttcggcccatttcgcggcgcccgcgaagcgcaaaat
atcatgaatcgaatcattaaagcccaaggtctatgccgacaagctttaggattggaagct
gctaaaaaagacggttcaccctgccaggcgcatttgcaaggcgattgtcgtggcgcttgc
attgggcgcgagccaatgggactgcacaatggacgtttgctggcggcattggccaagcat
caattagccgcatggccctatgctggcgcagtggccattgccgaaggaccagagtggtcg
acggtgtggcatgtgctggatcattggtgttatttgggatcaattgatcatcctgatcaa
ttgtcggcattgttggcggcagaacgacctgcatttgatgtcgatatggcgaagttgatt
cgtactgagcttaaaaaaaccaaaaccattgtgctcgattgcgcgactttggcgggttga
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