Deefgea piscis: HQN60_03625
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Entry
HQN60_03625 CDS
T06622
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
dee
Deefgea piscis
Pathway
dee03030
DNA replication
dee03430
Mismatch repair
dee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HQN60_03625 (holB)
03430 Mismatch repair
HQN60_03625 (holB)
03440 Homologous recombination
HQN60_03625 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dee03032
]
HQN60_03625 (holB)
03400 DNA repair and recombination proteins [BR:
dee03400
]
HQN60_03625 (holB)
Enzymes [BR:
dee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HQN60_03625 (holB)
DNA replication proteins [BR:
dee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HQN60_03625 (holB)
DNA repair and recombination proteins [BR:
dee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HQN60_03625 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
nSTAND3
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QKJ68082
UniProt:
A0A6M8SRZ0
LinkDB
All DBs
Position
complement(759407..760444)
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AA seq
345 aa
AA seq
DB search
MNKTPTLYPWLQTAWQELLRERDRWPHALLLTGEPGIGKRAFAVYLAQFLLCEDTQKSTQ
PCGVCDGCRWFLAGNHPDYRVLQPEDAEEERPDETESKKAKKKSEVIRVEDVRALADFVN
LSAHRRSVRVTLVVPADTMNVAAANAFLKTLEEPPAGAIFILVADHWRRLLPTIRSRCRV
FPLALPDSSVAMQWLNAHGVVNPALHLAHTGGAPLAAMDDAAAEWLAVRQNFLTQIAEPA
TLDVLKLCTELDKAKLDTDLVITWLQKWIYDLISLGLAGKIRYYPDWQDALTRLAPRAPQ
LMQYVNQLTDAQKLSRHPLNQRLVFENLLFAYVDALRGPSRQGKI
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaacaccgactttatacccatggttacagactgcatggcaagagttgctacgc
gagcgagatcgctggcctcatgctttattgctgacgggtgaacccggtattggtaagcgt
gcttttgcagtttatctcgcgcaatttcttctttgcgaagacacccagaaatcaacgcag
ccttgtggtgtttgcgatggctgccgttggtttttagctggtaatcatccggactatcgc
gtgttgcagccggaggacgctgaagaagagcgcccagatgagactgaaagcaaaaaagcc
aagaaaaaatcagaagttattcgagtggaagatgtgcgggctttggctgacttcgtcaat
ctctcggcacatcgacgcagtgtgcgggtgacattagtcgtgccggccgacacgatgaat
gtggctgccgctaatgcatttttaaaaacactcgaagagccaccagctggcgcaatcttt
attttggtagccgatcactggcgccgcttattgccaacgatacgtagccgttgccgtgta
tttcctttggcgctacctgattcatcggtggcgatgcaatggttgaatgcccatggcgtg
gtgaatccggcattgcacttggcgcataccggcggtgcgccattggcggcaatggatgat
gccgcagcagaatggctcgccgtgcggcagaactttctaacgcagattgcagaaccggcg
actttagatgtattaaaactctgtaccgaattagataaagccaaactagataccgattta
gtgattacatggctacagaagtggatttacgatctgattagtttgggcttggcggggaaa
attcgttattatccagattggcaagatgcattaacgcgtcttgctccacgagcgccacag
ttgatgcaatacgtgaatcaactcactgatgcgcaaaaattatctcgtcatccgctcaat
cagcgactggtttttgaaaacctgttgtttgcctatgtggatgccttacgtgggccgtct
cgccaaggaaaaatatga
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