Deefgea piscis: HQN60_05015
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Entry
HQN60_05015 CDS
T06622
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
dee
Deefgea piscis
Pathway
dee00541
Biosynthesis of various nucleotide sugars
dee01100
Metabolic pathways
dee01250
Biosynthesis of nucleotide sugars
Module
dee_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
dee00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HQN60_05015 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dee01005
]
HQN60_05015 (kdsB)
Enzymes [BR:
dee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
HQN60_05015 (kdsB)
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
HQN60_05015 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
dee01005
]
Lipid A
HQN60_05015 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Hydrolase_3
Hydrolase
Hydrolase_6
Robl_LC7
Motif
Other DBs
NCBI-ProteinID:
QKJ66124
UniProt:
A0A6M8SPP7
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Position
complement(1036408..1037682)
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AA seq
424 aa
AA seq
DB search
MQTALIVIPARYGSTRLPGKPLADLVGKPMIQHVYERAMQVPGVAGVVVATDDARVMAAV
QQFGGQAMLTSSEHVSGTDRLVEVMAAFPADIYLNVQGDEPLVRPDDLAALLALMQSDAT
AAVGSLCHAIDADEALNPNAVKVVMGNQGEALYFSRSPIPYPRDAQSARYFKHVGVYAYR
AAVLAAYQQMPVPMLEQTESLEQLRLLTAGFSIRMLQVEPTGPGVDTPACLERVRAMMLG
LPEVAVNPLAAVRLVISDVDGVLTDGGIYYDATGECLKRFHVRDGLGIRMLEENGVRVAL
LSGRDSPTLRKRAADLGVSLAAYGVKDKAKACFELMAQAGVTAAQTACLGDDSIDLPAFA
SCGLSFAVADAPSYVQQRASEVLQTAGGHGAFRELADRILLAQGKAAVFNSADGFMQHIV
NVAQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcagacggctttaattgtgattcctgcccgctatggctctacgcgtttaccgggtaaa
ccgctggctgatttagtgggcaagcccatgattcagcatgtttacgagcgggcaatgcaa
gtgcccggtgtggctggcgtggtggtggcgacggatgatgcgcgagtgatggcggcagtg
cagcaatttggcggccaagccatgctcacgtcgagcgagcatgtttcgggtacagatcgt
ttggttgaagtgatggcggcttttcctgcggatatttatctgaatgtgcaaggcgacgag
cctttggtgcggcccgatgatttggcggctttgttggcgctgatgcaatcggatgcgact
gcggcggtgggctcactttgccatgcgattgatgccgatgaagcgctgaatccaaacgca
gttaaggtggtgatgggtaatcaaggcgaggctttgtattttagccgttcgccgattcct
tatccgcgtgatgcccagagcgcacgctattttaagcacgttggcgtgtatgcgtatcgg
gcggcagtgttggcggcgtatcagcaaatgccggtaccgatgctggagcaaaccgagtct
ttggagcaattacgcttactgactgcgggcttctcgattcgtatgttgcaagtcgaacca
accgggccgggggttgataccccggcgtgtttggagcgggtgcgcgcgatgatgttgggc
ctacccgaggtggccgttaatccattggcggcagtgcgcttggtgattagcgatgtggat
ggcgtgctaacggatggcggcatttattacgatgcaacgggtgaatgccttaagcggttt
catgtgcgtgatggtttgggtattcgcatgctggaagaaaacggcgtgcgggtggcgcta
ttgtctgggcgtgattcgccaactttgcgtaagcgagccgccgatttgggcgtgagtttg
gcggcgtatggcgttaaagacaaagccaaggcttgcttcgaactcatggcgcaagctggc
gttactgcggcgcaaacggcgtgcttgggtgatgacagcattgatttaccggcgtttgct
agctgcggtttgtcgtttgcggtggccgatgcgccaagctatgtgcagcagcgggctagc
gaagtgttgcaaacggcgggtggtcatggtgcttttcgcgagttggcagatcggatttta
ttagcgcaaggcaaggcggctgtttttaatagtgccgatggttttatgcagcacattgtg
aatgtggcgcagtga
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