Deefgea piscis: HQN60_07090
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Entry
HQN60_07090 CDS
T06622
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
dee
Deefgea piscis
Brite
KEGG Orthology (KO) [BR:
dee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dee03021
]
HQN60_07090 (rpoH)
Transcription machinery [BR:
dee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HQN60_07090 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
NblA
QRPTase_N
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QKJ68136
UniProt:
A0A6M8SWZ8
LinkDB
All DBs
Position
1471555..1472412
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AA seq
285 aa
AA seq
DB search
MGNAMTLSTLSIGDSIERYIQRVNAVPMLSPQEEHDLATRHQESGDVEAARQLVMSHLRV
VVSIARGYSGYGLPQADLIQEGNIGLMKAVKRFEATRGVRLYSFAVHWIKAEIHEYILRN
WRLVRIATTKAQRKLFFNLRSMKTSFAALTHKQAQEIADDLGVKPEEVLEMETRMTGQDI
ALVADDSDDDGYAPIDWLADSHNEPTAAMARIATDRLQSSGISEALDGLDERSRRIIEAR
WLTDDGESLTLHDLAAEFKVSAERIRQIETKALQKMKQALLPATV
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgcgatgacactttcaacattatcgattggcgatagtattgaacgttatatt
cagcgcgttaatgcggtacctatgctgtcacctcaagaagagcacgatttggcgacacga
caccaagaaagtggtgacgtggaggccgcgcgtcagcttgtgatgtcccacttgcgcgtc
gttgtttcgatcgcgcgaggttatagtggctatggtttaccacaagctgatttgatccaa
gaaggtaatattggtttaatgaaagcggttaaacgctttgaagccacacgcggtgtgcgc
ttgtattcgtttgctgtgcattggattaaagctgaaatccatgagtatattttacgcaat
tggcgcttagttcggattgcgacgactaaagcgcaacgtaaattgttttttaatctgcgc
tcaatgaaaactagctttgctgcgttaacgcataagcaagcgcaagaaatcgcggatgat
ttaggcgttaagcccgaagaagtccttgagatggaaacgcgcatgaccggtcaagatatt
gcactggtggctgatgatagtgatgatgatggctatgcgccgattgattggttagcagat
agccacaatgaaccgactgccgcgatggccagaattgcgactgatcgcttgcaatcaagc
ggtatttcagaagctttagacggcctagatgagcgtagtcgccgcattattgaagcgcgc
tggctgaccgatgacggtgagtctttgactttgcatgatttagccgcagagtttaaagtt
tcggccgagcgaattcggcagatcgagaccaaagcattgcaaaaaatgaagcaagctttg
ttgcctgctacggtttaa
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