Deefgea piscis: HQN60_07180
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Entry
HQN60_07180 CDS
T06622
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
dee
Deefgea piscis
Pathway
dee02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dee00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HQN60_07180 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dee02000
]
HQN60_07180 (msbA)
Enzymes [BR:
dee01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
HQN60_07180 (msbA)
Transporters [BR:
dee02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HQN60_07180 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA_29
DEAD
RsgA_GTPase
AAA_25
Zeta_toxin
NACHT
DUF3584
Scytalone_dh
AAA_24
DUF6338
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QKJ66496
UniProt:
A0A6M8ST01
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All DBs
Position
1491953..1493707
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AA seq
584 aa
AA seq
DB search
MNSKQLYFRILAYFGPYRGIVVMSILAMVVAGGVDAAMVKMLGVIIDSFKQNQAAAQAAW
LMPLALFGLGLVRLISSFGYEYGSAWLSSRVMHNLRQQVFERMMAMPIRFFDQSSVGVLL
SRVTFDINQIMDAGLNVLTVLVKDSVMAIALLGIMLWTDWQLTLFCLIMLPGAAVSIRIV
SKRQRRLSQQTQDTMGEMSQILDESLGGQRIIKIFGGASYEAKRFGAANQNVRRLTVKRA
ATASLNSGFTVFLIAVTIAAIIYFAGLRAADGAMTAGSFVTFMSSMMLLQQPIKNLSKLS
DSLHRGLAAADSVFGILDQPLEPDHGTLAPQRVKGHITISQLEFAYQVDGVKALAGIDLD
IKPGESVALVGQSGSGKTTLANLIPRFYEPSAGEIRLDGELLADYRLANLRSQIALVSQD
MVLFNDSVAANIAYGVDEIDMARVRAAADAAFATEFIEQMPQGFAEMLGENGVRLSGGQR
QRLAIARAIYKDAPILILDEATSALDTESERKVQEALENLMVGRTTLVIAHRLSTIEKAD
RIVVMQQGKIIESGTHQELIERDGVYTQMHAVQFSLAENTVATR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcaaacagctgtatttccgaattcttgcctactttggcccgtaccgtggcatc
gtcgtgatgtcgattttggccatggtggtggctggcggtgtcgatgccgcgatggtcaaa
atgctcggcgtgattattgatagctttaagcaaaatcaggcggcagcacaggccgcatgg
ttgatgccattggctttgtttggcttaggcttggtgcgtttgatttctagctttggctac
gaatatggcagtgcttggttgtcgtcacgcgtgatgcataatttacgccagcaagtgttt
gagcggatgatggccatgccgattcgcttttttgatcaatcgtcagtcggtgttttattg
tcgcgggtgacgtttgatattaaccagattatggatgcgggcttgaatgtgctcaccgtg
ttggtcaaagactcggtgatggcgattgctttgcttggcattatgctgtggaccgattgg
cagctgactttgttttgcttgattatgctgcccggtgcggcagtatcgattcggattgtg
agtaaacgccagcgaagattatcgcaacaaacgcaagacaccatgggcgaaatgagccag
atcttggatgagagcttgggtggacagcgaattattaagatttttggtggagcgagctat
gaagcgaaacgttttggtgccgccaatcaaaatgtgcggcgtttaaccgtaaagcgcgca
gccaccgcgagtttgaactctggctttacggtgtttttaattgcggtaacgattgcggcg
attatttattttgctggtttacgcgcagccgatggcgcgatgaccgcaggctcatttgtg
acgtttatgagttccatgatgctgttacagcagccaattaaaaatctatctaagctcagc
gattcattgcatcgcggtttggccgccgcagactcggtgtttggtattttggatcagcca
ttagagccagatcacggcacattggcgccgcagcgcgtgaaaggacatatcacgattagc
cagctggagtttgcctatcaagtggatggcgtgaaagcgttagcaggtattgatttagac
atcaaaccgggtgaaagcgtggctttggtcggccagtcaggcagtggcaaaaccaccttg
gccaatttgattccgcgattttatgagcctagcgccggtgaaattcgtcttgatggcgag
ttgctggcggattatcgtttggccaatttacgttcacaaatcgctttagtgtcgcaagat
atggtgttatttaatgacagcgttgccgccaatattgcgtatggtgtggatgaaatcgat
atggcgcgggtgcgggcggcggccgatgcggcatttgctactgaatttattgaacaaatg
ccacaaggctttgcggaaatgctcggtgaaaatggtgtgcgtttatcgggcggccagcga
caacgcttagcgattgcaagggcgatttataaagacgcaccgatcttgattttggatgaa
gcaaccagtgcgcttgataccgagtcagaacgtaaagtgcaagaagcactagaaaacctg
atggtggggcgtactaccttggtaattgcgcatcgcttatccaccattgaaaaagctgac
cgcattgtggtgatgcagcaaggcaaaatcattgaaagcggtacgcatcaagagctcatt
gagcgtgatggcgtgtatacgcaaatgcatgcggtacagttttcacttgcggaaaacacc
gtggcgacgcgctaa
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