Deefgea piscis: HQN60_07690
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Entry
HQN60_07690 CDS
T06622
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dee
Deefgea piscis
Pathway
dee03420
Nucleotide excision repair
dee03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HQN60_07690
03430 Mismatch repair
HQN60_07690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dee03400
]
HQN60_07690
Enzymes [BR:
dee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HQN60_07690
DNA repair and recombination proteins [BR:
dee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HQN60_07690
MMR (mismatch excision repair)
Other MMR factors
HQN60_07690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QKJ66596
UniProt:
A0A6M8ST62
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All DBs
Position
1599816..1601972
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AA seq
718 aa
AA seq
DB search
MSHALTAKLNPQQAAAVELPAEHALILAGAGSGKTSVLTTRIAWLLSTGQISPSGLLAVT
FTNKSAKEMLSRITAMLPLNPRGLWVGTFHGLCNRMLRLHHRDAGLPEAFAILDQSEQLG
AIKRVLKLLTLDDDKYPPRTVQHYINGHKENGRRAADVEAWDDYSRQLKLAYEEYEKQCN
REGVADFSELLLRCYELLSYKPEIRAHYQQRFSHILVDEFQDTNRLQYAWLKLLAGQNSA
IFAVGDDDQSIYAFRGANVGNMIDFQSDFLVKHVIRLEQNYRSHGNILDAANAVISHNTQ
RLGKELWTQASAGELIRVFEASSDFEESQFIVEEAQALIRDGMAASEIAILYRSNAQSRI
IEHALFSAGVAYRVYGGLRFFERQEIKHALAYLRLMANPSDDNALLRVINFPTRGIGARS
VEALIEKARLEGCSLWQAACMGASGRGAAALGQFVQIIDGMQNRMAGLAMTDVVRVMLEL
SGLLAHYQKDKDGEERVANLEELVNAAATFISEDENNLIAFLSHASLEAGDHQAGAHEDA
LQLMTVHAAKGLEFNAVFLSGLEEGLFPHENSSKDQASVEEERRLMYVAITRARQRLYLT
LAQSRMLHGQTRYGVASRFLDEIPQTLLKYLNRGYAPSSYSSAAPSSFNSAAAAKPVAAP
KKATPEHGLAIGCKVEHPKFGLGVVTDHEGGATGNVQVNFALHGSKWLAVAYAKLKVV
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatgctttaactgctaaattaaatcctcaacaagcggctgcggttgaattacct
gctgaacacgctttaattttagctggggcaggcagtggtaaaaccagtgtattaaccaca
cgaattgcatggctattatctaccggacaaataagcccatcaggtttattagcggtgaca
tttaccaataaatcagccaaagaaatgttgtcgcgaattactgcaatgttgccattaaat
ccgcgtggattatgggtgggcacatttcatggtttatgtaatcgaatgttacgtttgcat
caccgtgatgcaggcttgcccgaagcttttgcgattttggatcaatctgagcaattgggc
gcgattaagcgtgtattaaaattactgactttagatgacgataaatatccaccgcgtacc
gtgcagcattacattaatggccataaagaaaatggtcgtcgtgctgctgacgttgaggcg
tgggatgattattctcgccaattgaaattggcgtatgaagaatacgaaaaacaatgcaat
cgagaaggtgtggctgacttttccgagctactccttcggtgttatgaattgttgtcttat
aaacccgaaattcgagcgcattaccaacagcgtttttcgcatattttagtcgatgagttt
caagacacgaatcgattgcaatacgcttggcttaaattattagctgggcaaaattcagct
atttttgctgttggcgatgatgatcaatctatttatgcatttcgcggtgcgaatgtgggc
aatatgattgattttcaatctgattttttagtcaaacatgtgattcgtttagagcaaaac
tatcgcagccacggcaatatccttgacgccgccaatgcggtgattagccataatacccag
cgcttggggaaagaattatggactcaggccagtgccggtgaattgattcgcgtttttgag
gccagctcggactttgaagaatcgcaatttattgttgaagaagcacaggccttaattcgc
gatggcatggcggctagcgaaattgcgattttatatcgtagtaatgcacaatcgcggatt
attgagcatgcactgttttcagcgggtgtggcttatcgcgtgtatggcggtttacgcttt
tttgagcgacaagaaattaaacacgctttggcgtatttgcgcttaatggccaatcctagc
gatgacaatgccttgctgcgggtgattaatttccccactcgcggaattggcgcacgcagc
gttgaggcgttgatagaaaaagcgcgtttagaaggttgctcactgtggcaggccgcgtgt
atgggcgcttcagggcgtggtgcggcggctttaggccagtttgttcagatcattgatggc
atgcaaaatcggatggccggtttggcaatgaccgacgtagtgcgagtcatgcttgagttg
tctggcctgctggcgcattaccaaaaagacaaagatggcgaagagcgggttgccaacttg
gaagagctggtcaatgccgctgcgacgtttattagtgaagatgaaaacaatctgatcgcc
tttttatcgcacgccagtttagaagcgggcgaccatcaagcgggggcgcatgaagacgcg
ctgcaattgatgacggtgcatgcggccaaaggcttggagtttaacgcggtgtttttgtct
ggccttgaagaaggcttgtttccacatgaaaacagcagtaaagatcaggccagcgtcgaa
gaagagcggcgcttaatgtatgtggcgattactcgcgctcgccagcgcttatatctgacg
ttagcgcaaagccgcatgctgcatgggcaaacgcgctacggtgttgccagccgctttttg
gatgagattccacagactttattaaaatatttaaatcgtggttatgcgcccagtagctat
agttcggctgcgccgagtagttttaactcggcagcggcagcaaaaccggtggctgcgcct
aaaaaagccacccccgagcatggcttggcgattggttgcaaggtggagcatcctaaattt
ggtcttggcgtggtgacggatcacgaaggcggggcgacgggaaatgtgcaggtgaacttt
gccctgcatggcagtaaatggttggcggttgcctacgctaaattgaaagttgtgtga
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