Deefgea piscis: HQN60_08135
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Entry
HQN60_08135 CDS
T06622
Symbol
lptF
Name
(GenBank) LPS export ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
dee
Deefgea piscis
Pathway
dee02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dee00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HQN60_08135 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dee02000
]
HQN60_08135 (lptF)
Transporters [BR:
dee02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
HQN60_08135 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
QKJ66675
UniProt:
A0A6M8SNC3
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All DBs
Position
1702918..1703979
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AA seq
353 aa
AA seq
DB search
MLFRKTLIHEMTWVAFGLFVVLLVIVMTSQVVRLLGEAAVGALASSAVWAVMGFAAIRYF
PILFSLMLFIAILTVLTRLWKDHEMVVWFAAGRSIRSFILPVMQMGVPVVILIALLALYV
SPWAQLKGREYRDASLKNEEVSQVSPGVFRESRGADRVYFIENFSGDRGEGENVFVQIRQ
DGKISTVLAEQGGMFVDEMGDRWMWLKDATAYKAPSGSPQYDILTFKEGRVRVEDPSPVV
VNPATSAMSTAKLWGSDSREYQAELAWRMALPIQAFLLMLAAIPLAFSNPRGGRGFHLVI
AALLAFGYYNGINVMQAWIAVGKISPQIGMWPLHGLVALLTIGLFWWRSRVRG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttcgaaaaacacttattcatgaaatgacctgggtggcttttgggctattcgtg
gttctactggtcattgtcatgacctcgcaagtcgttcgtttgctcggagaagccgcggtg
ggcgcattagcctcttcggccgtgtgggcggtgatgggctttgcggcgattcgttatttc
ccgattttattttctttaatgctgtttatcgccattttgacggtgctcacccgactgtgg
aaagaccacgaaatggtggtgtggttcgcggcgggacgctcgattcgcagctttatttta
ccggtaatgcaaatgggcgtgccggtggtgatattaatcgccttgctggccttgtatgta
tcgccgtgggcgcagctcaaagggcgagaatatcgcgatgccagtttaaaaaacgaagaa
gtctcgcaagtgtcgcccggggtttttcgtgagtcgcgcggcgcggatcgggtgtatttt
attgaaaatttctccggtgatcgcggtgagggtgaaaacgtctttgtgcaaattcgccaa
gacggcaaaatctccaccgtgctggccgagcaaggcggcatgtttgttgatgaaatgggc
gatcgttggatgtggcttaaagacgctactgcctataaagcccctagcggctcgccacaa
tacgatattttaacgtttaaagaaggccgcgttcgcgttgaagacccgtcgccagtggtg
gtgaatcctgcaacctcggcgatgagtaccgccaaattatggggcagtgattcgcgggaa
tatcaagccgagttagcttggcgaatggcgttgccgattcaggcctttttattgatgttg
gccgcaattccgttggccttttccaatcctcgtggcggccgtggctttcatttggtgatt
gccgctttattggcatttggttattacaacggtatcaatgtgatgcaagcttggattgcc
gtcggcaaaatttcaccgcaaatagggatgtggcctttgcatggtttggtggccttactg
accatcggtttgttctggtggcgcagccgcgtacgaggttaa
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