Deefgea piscis: HQN60_09835
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Entry
HQN60_09835 CDS
T06622
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dee
Deefgea piscis
Pathway
dee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HQN60_09835 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dee03019
]
HQN60_09835 (pcnB)
Enzymes [BR:
dee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HQN60_09835 (pcnB)
Messenger RNA biogenesis [BR:
dee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HQN60_09835 (pcnB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
QKJ66969
UniProt:
A0A6M8SWG4
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All DBs
Position
2104281..2105624
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AA seq
447 aa
AA seq
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MIRKFIGKVLRRPGRRVVHAKHYGIRRDQLHSGALKVCDRLQAAGYEAYIVGGAVRDLLL
GKSPKDFDVATSATPEQVRHIFNRSRIIGRRFRIVHVPFYDRGGEEIIEVTTFRGSAESP
TDASGRIIRDNVYGTIAEDADRRDFTVNALYYDPNTEEIIDFHHGIEDLEKQQLVMIGDP
VKRYHEDPVRMLRAARLSAKLGLAIAPDTRKPIRDHAALLENIPSARLFDEMMKLLLSGK
AWDCMQALRAHGLHQPLFPLLDKLLSQPETAKFLQKALENTDQRLADDKPVSAGFLFAAL
LWHEVEALWQKRLAAGESKISALIDAMNDVESKVSKRLAVPNRYSAAMKEIWLLQPRFEQ
RVGLRPFRLLEQARFRAAYDFLLLRADCGLVEKSLADWWTQFQVSDETERTAMIDLAAKN
GQSGDAPAKRRKRSRQRKPAALKQSGN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtaaatttatcggcaaggtgctacggcgcccaggacggcgtgtagtgcacgcc
aagcattatggtattcgccgtgatcaactgcactctggtgcgttgaaagtctgtgatcgt
ctgcaagcggcgggttacgaggcgtatatcgtgggcggagcagtgcgtgatttattgctt
ggtaagtcacccaaagattttgacgttgcgactagcgctacgccggagcaggtgcggcat
atctttaatcgttcgcgcattattggccgccgtttccgaattgtgcatgtgccattttat
gatcgcggcggtgaagagattattgaagtgaccaccttccgtggtagcgcagagtccccc
accgatgccagtggacgaattattcgtgacaatgtctatggcacgattgctgaagatgct
gatcgtcgtgactttacggttaatgccttgtattacgatccaaataccgaagaaattatc
gattttcaccacggtatcgaagatttagaaaagcagcagttggtgatgattggtgatccg
gttaaacgctaccacgaagatccagtccggatgctgcgtgccgcgcggttatcggccaaa
ttaggtttggcgattgcgccagatactcgcaagccaattcgtgatcatgccgctttactg
gaaaatatcccgtcagcgcgattgttcgatgaaatgatgaagttattactgtcgggcaag
gcgtgggattgtatgcaagcgttgcgggcgcatggtttacatcagcctttgtttccatta
ttggataagctgctttctcagccagaaaccgccaagtttttacaaaaagcacttgaaaac
accgatcagcgcttagctgatgataagccggtttcggctggatttttgtttgccgcttta
ctttggcacgaagtcgaagcgctgtggcaaaagcgtcttgctgccggtgaaagcaaaatc
agcgccttgatcgacgcgatgaatgatgttgaaagtaaagtcagcaaacgtttggcagtg
cccaatcgctacagtgccgcaatgaaagaaatttggttattgcagccgcgatttgagcaa
cgtgttggtctgcgtccgttccgacttttagagcaagcgcgatttcgggcggcgtatgat
ttcttgttattgcgtgccgattgcggtttagtggaaaaatcattggccgattggtggacg
caatttcaagtgagtgacgaaaccgaacgaacggcgatgattgacttggcggccaaaaat
ggccaatcgggtgatgctcccgccaaacgtcgtaaacgtagtcgtcagcgtaaacctgcg
gctctaaagcagtctggaaactaa
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