Deefgea piscis: HQN60_10425
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Entry
HQN60_10425 CDS
T06622
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
dee
Deefgea piscis
Brite
KEGG Orthology (KO) [BR:
dee00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dee02044
]
HQN60_10425
02035 Bacterial motility proteins [BR:
dee02035
]
HQN60_10425
Secretion system [BR:
dee02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
HQN60_10425
Bacterial motility proteins [BR:
dee02035
]
Pilus system
Pilus assembly proteins
HQN60_10425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PQQ
UBA_At5g58720
Motif
Other DBs
NCBI-ProteinID:
QKJ67077
UniProt:
A0A6M8SZ63
LinkDB
All DBs
Position
complement(2217064..2220633)
Genome browser
AA seq
1189 aa
AA seq
DB search
MFKCQIKSITYLVAIAVATLTPPAWAAIEIAPAPLYVGGFVPGSLALVPSVEFPTIISQA
NVGAYSSANEYTGYFDANKCYTYVNDPIEANRHFKPVSRANARSCSGNWSGNFMNWAVTQ
TIDPFRAALTGGYRVRDTVGETWLEKARHDRGGGYGDRTSNVAGTTPFSWGNLTIRVANL
GNKMYFTGTGNVNNPGTVRPYPDSISNAKKDQVFEASVRVKVCDSAFPEKNCTQYGSNWK
PEGLIQQYSSNLQYSIFGYLNDSNALRDGGVMRAKNKFVGEYKLDPSSNRLVANSSREWD
PSTGILYRNPDSADAADTNAGIQDSGVINYLNKFGQMTNRQHKSYDPVSELYYAAIRYFK
NLGNVASYSTLSGDSTQKYEQADGFPVITRWDDPIKYWCQKNVILGIGDVNSHRDKNLPG
STQSRGEPSMPSEVSDDKTINVVTATQKIAQLEGISINDTQFTGRDNSAYIAGLAYDAHT
VDLRPEGTSSSSEQLKRIKGMQTLSTYWVDVREGGVLANRSSNQYWLAAKYGGFKVPNDF
KPYDSKTISIADALWHTSGEILSPTNDKRPDNFFVASDAQNMVSGLTKAFASISAERTSS
AAALTSSSNKIEPGVAVFQTTFSSSSWSGDLSAYAINQTTQKPESTPLWSAVAALPKPAD
RKIYFNQTPQAASGKTEFKPGASGLDPNVFTTDIVNYLRGDRSKEVPSGAFRARSSALGD
IVNSAPVYVGSPNPRLYAKDASYVQFAKDKANRTPMVYVGGNDGMLHGFNAKTGVEVFAF
IPNAVLNKQLANTASPDYSHQYFVDGEITVADIYINSRWKTILVASLGRGGRATFALDVT
DPNNMLPLWENNPQRAPNIGQVIGKPVIAQLAKGSWSAIMGNGLNSAGDKAQLMMIDIDS
GDATFVDTGVASNNGLSAADVWDTNGDGIHDTAYAGDQRGNLWKFSNLKSNPTAFKLFSA
TSSSGAQAISAAPIAVVNPKTKVRWVFFGTGRFLNTNDLSNKDVQSWYGIIDSNQAVERS
SLMARRILKDGSTTNGSIRVMSTPSPNDMQGKSGWVIDFKGSGVAIEGERMLLPNQIRGN
SLIGTTRIPDGSDPCLPEGRGYTMAIDPFSGASLDQGFFDLNGDGKVDEKDQIDGAYASG
VGFDSSPNAPIFVGDGMISSLENAGTSHIKTQGKLGRIVRTSWREILGV
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaatgtcagatcaaatcgatcacctacttggtcgcgatcgcggttgcgacgcta
acgccgcccgcttgggctgcgattgagattgcccctgctcccttgtatgtgggtggtttt
gtgcccggcagcttggccttagtgccctcagttgagtttccgaccattattagtcaggcc
aatgtcggcgcttattcatctgccaacgaatacaccggctattttgacgccaataaatgc
tacacctacgtcaatgaccccatagaggccaatcgccatttcaaacccgtcagcagagca
aacgcgcgcagttgctcggggaattggagtggtaattttatgaattgggcggtcacacaa
accatagatccatttcgcgcagcactaactggcggctatcgcgttcgcgatacggtaggc
gagacgtggctagaaaaagctcgccatgatcgtggcggcggttatggtgatcgcaccagc
aacgtcgccggtactacgccatttagttggggcaatctgacgatacgcgtcgccaatttg
ggcaataagatgtatttcaccggcactggtaatgtcaacaacccaggcacagtgcggcct
tatcctgattcaatcagcaatgctaaaaaagatcaggtgtttgaagcctcggtgcgcgtg
aaagtctgcgactcggccttccccgaaaaaaactgcacgcaatatggcagtaattggaag
ccagagggcttgattcaacaatattcaagtaacttgcaatacagtatttttggctatctc
aatgacagtaacgcactgcgagatggtggcgtgatgcgcgccaaaaataaatttgtcggt
gaatataaactcgaccccagcagcaaccgtttagtcgccaatagttcacgcgaatgggac
cctagcacagggattttataccgcaatccagattctgctgatgcggccgataccaatgcg
ggcattcaagatagtggcgtgattaactatctgaataagtttggccaaatgaccaatcgc
caacacaaaagttacgacccggtgagcgagctgtattacgccgcgattcgttattttaaa
aacttgggcaatgtagcgagttattccactttgtccggcgatagcacgcaaaaatatgag
caagctgatggctttccggtgattacccgctgggatgatccgattaaatactggtgccaa
aaaaacgtgattttagggattggcgacgttaattcgcaccgagacaaaaacttaccgggc
agtacccaaagtcgcggtgagccaagcatgccaagcgaagtgagtgatgacaaaaccatt
aatgtggtcaccgcaacgcaaaaaatcgcgcaattagaagggatcagcatcaacgatacg
caatttactggccgcgacaactcagcgtatatcgccggtttagcctatgacgcgcacacc
gtggatctgcgccccgaagggactagcagcagtagcgagcaactcaaacgcattaaaggc
atgcaaaccttatctacgtattgggttgatgtccgtgaaggtggtgttttagctaaccgc
agcagcaatcaatattggttagcagcaaaatatggcggttttaaagtaccgaatgacttt
aaaccttacgatagcaaaaccatcagcattgccgatgcactgtggcatacctcaggcgaa
attttatctccgaccaacgacaagcgcccagataatttctttgtcgctagtgacgcacaa
aatatggtctcaggcctgactaaagcctttgctagtatcagcgccgagagaaccagctcg
gccgcggccctgacttcgtcgagcaataaaattgagcctggcgtcgcggtgtttcaaact
acgttttctagctctagctggagtggtgatttaagcgcctacgccatcaatcaaaccacg
caaaaaccagaaagcacgccgttatggagcgccgttgccgcactacctaagccggctgac
cgtaaaatttattttaatcaaaccccacaagcggcctcaggcaagactgaatttaagccc
ggtgccagcggtttagatcccaatgtattcacgactgatatcgttaactacttgcgcggg
gatcgtagcaaagaagtaccgagtggcgcttttcgagcacgtagcagtgcactgggtgac
attgtcaattctgcgccagtgtatgtcggcagccctaaccctcggctgtatgccaaagac
gccagctatgtgcaatttgccaaagacaaagccaatcgcacgccgatggtgtatgtcggc
ggtaacgacggcatgttgcatgggtttaatgctaaaaccggcgttgaagtgtttgccttt
attcccaatgcggtactcaataagcagctggccaacacggcctcacccgactatagccat
cagtactttgtcgatggtgaaatcaccgtggccgatatttatattaattcccgctggaaa
acgatcttagtcgctagtctaggccgaggtggccgtgcgacttttgcactggacgtgacc
gaccccaacaatatgttgccactatgggaaaacaacccacaacgcgcgccaaacattggc
caagtcattggtaaaccggtgattgcacaattagccaaaggcagttggagcgccattatg
ggcaacggccttaacagcgctggcgacaaagcccaattgatgatgattgatatcgacagc
ggtgatgccacctttgtcgacaccggcgttgcgagcaataacggcctatctgcggccgac
gtgtgggataccaatggcgatgggattcatgacacggcctacgcgggcgatcaacgtggc
aatctttggaaatttagtaatttaaaaagcaaccccactgccttcaagctgtttagcgcc
accagcagctcgggcgctcaagcgattagcgcggcaccgattgctgttgttaaccccaaa
accaaagttcgctgggtgttttttggcactggccgttttttaaataccaatgacttaagc
aataaagacgtgcaaagctggtatgggattatcgacagcaatcaagcggtggagcgtagt
agcttgatggcgcgaagaatcctcaaagacggctcgaccaccaatggctcgattcgcgtg
atgtccacaccaagcccgaatgatatgcaaggcaaatcaggctgggtgattgattttaaa
ggctcgggtgtggccatcgagggcgaacgaatgctgttaccgaatcaaattcgcggcaat
agcttaattggcacaactcggattccagacgggagcgatccttgtttacccgaaggtcgc
ggctacaccatggccattgatccatttagcggcgcgagtttagatcagggcttttttgat
ctcaatggcgatggcaaagtcgatgaaaaagatcaaattgatggtgcttacgccagtggt
gttggctttgacagtagcccgaatgcgccgatttttgttggcgacggcatgatttccagc
ttggaaaacgccggtacttcacacattaaaacccaaggaaaattaggacgcattgttcgc
acttcttggcgtgaaattttaggagtttaa
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