Deefgea piscis: HQN60_10465
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Entry
HQN60_10465 CDS
T06622
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dee
Deefgea piscis
Brite
KEGG Orthology (KO) [BR:
dee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dee03400
]
HQN60_10465
DNA repair and recombination proteins [BR:
dee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HQN60_10465
Archaeal homologous recombinant proteins
HQN60_10465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND3
AAA_22
RsgA_GTPase
AAA_21
cobW
Motif
Other DBs
NCBI-ProteinID:
QKJ67085
UniProt:
A0A6M8SPE6
LinkDB
All DBs
Position
2227319..2231053
Genome browser
AA seq
1244 aa
AA seq
DB search
MKILAIRGKNLASLAGEFGVDFEQEPLKSAGLFAISGPTGAGKSTLLDALCMALYESTPR
LLKAGSGKTLPDGTDLITHQDAANLLRRGCADGYAEVDFVGNDGASYRARWSVRRARGSV
KGSLQASTMSLLQLPHMQPIGGKKNEVKAEIIQRIGLNFEQFTRAVLLAQNEFSSFLKAD
DNERGELLETLTGSTIYSQLSQGAFVRAKAELQALQRINDRLADQKPLSAEARSELDVAA
TTAAQALSTLDTTAQSLNNALRWYTEADKLALGVNAAQVAVDEQQTAHAAAASRREMLQQ
LDLVQAARPLLLDVDRLATSLAQTSAAITVGQQQLSAANQASDTANAALSQAQSQQLAAE
QAQSAAAPQLDAAKKLDTSIDIRQSAQAALHSTVAQANHAAQQAWAQHEQQQKELEHGYV
QLANAEKWLHAHTQYEDLAQNWAVYAVQLQQAAAARTAAQGAASQCAQLTQAHAMQTAQL
SAANEQLATAQIALQQAEQQRQVAIAQQAQIDIGSLPAQKVQWTQRRDDLASAQQLVQRI
SEYTAQLNKLLHQQAMQQAAQAQTEQNLAVLTQQQPLIAATLAQAERSLKSAEAACNSNV
ESLRDALQEDAPCPVCGALDHPYVSANPQLQAMLASLQAEVATQQQQQQQQLSLHSQLNA
ELANIQRALAEIHPEITRITAERDALNSQWQNHALLAEISAMNPAEQPAWFAEQHTALQT
QASAMAAQEAAWQQAQQAKDSAQAAFEQANQAQQSQKDAVQQCQSVLQQIATQRAAAQLA
EQEHAARCAASLAQLAPALQFDAAWQARWQADPAVEQAHWQQQAQLWLAQHSAHASGLQS
TALLAQTVAGLLAAAQQTSAEQQRLQAQLNAEQAALSALQSERQALFAGHSVASVEAQLA
QALTSAKALQNQAQLAAQSAAQHVVREQAALAQAQAQLSQWQQQAHSAQQQLDQWLAEQG
IELAVLRQHLALDAAGLASERAALLALDTAVLHAQTVLQERCLQQQHHQAQQPELVNAED
GAALAQLQAQVADISREQAAAQAKAASLQLQLAQDEARRSAAADLLLEITAQETIQRRWA
QLGDLIGSSDGKKFRNYAQQYTLDVLLGYSNRHLQQLSRRYRLQRINDTLALMVIDQDMG
DEARSVHSLSGGESFLVSLALALGLASLSSQRVRVESLFIDEGFGSLDADTLSIAMDALD
GLQALGRKVGVISHVQEMTERIASKISVQKTAGGRSVISVMEGR
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttagcgatacgcggtaaaaaccttgcctctttggccggtgaatttggggtt
gattttgagcaagagccacttaaatcggccggtttatttgccattagcggcccaacgggc
gctggcaaaagcacattgctggacgcgctgtgtatggcgctgtatgagagcacgccgcgc
ttacttaaagccggtagcggtaaaaccttgcctgacggcaccgatttaatcacccatcaa
gacgccgccaatttgctgcgccgtggctgtgctgatggctatgccgaagtggattttgtc
ggcaacgatggtgcgagctatcgcgcgcgctggagcgtgcgccgggcgcgcggcagtgtt
aaaggcagcttgcaagccagtacgatgtcgctgctgcaattgccgcatatgcagccgatt
ggcggcaaaaaaaatgaagtcaaagccgagatcatccagcgcattggtttgaattttgag
caattcactcgcgcggtattgctggcgcaaaatgagttttccagctttttaaaagccgat
gacaacgagcgcggcgagctattagaaacgctcaccggcagcaccatttatagtcagctc
tcgcaaggcgcttttgttcgcgccaaagctgaattacaagcgctgcagcggattaacgat
cgactcgccgatcaaaaaccactcagtgcagaggcgcgtagcgagctggatgtggcggcc
actactgccgcgcaagctttaagcaccctcgataccacggcgcagtcattgaataacgca
ctgcgctggtacaccgaggccgacaaactcgcccttggcgtgaacgccgcgcaagttgcc
gtggatgaacaacagactgcccacgcggcggcggcctcacgccgcgaaatgctgcagcag
ctcgatctggtgcaagccgcccgccctttattgcttgatgtggatcgccttgccacgagt
ttggcgcaaaccagcgcggccatcaccgtggggcagcagcaattgagcgcggccaatcag
gccagtgacacagccaatgccgcattgagccaagcgcaaagccagcaactggcggccgaa
caagcgcaaagcgctgcggcgccacaactggatgccgccaaaaagctcgacaccagcatc
gacattcgccaatccgcacaagcggcattgcacagtacggtggcgcaagccaatcacgcc
gcgcagcaagcatgggcgcagcacgagcagcaacaaaaagagcttgagcatgggtatgta
cagctagccaatgctgaaaaatggctgcatgcacatacccagtatgaagatttggcgcag
aattgggctgtgtatgcggtgcagctacaacaagcggcagcggcgcgcaccgccgctcaa
ggcgcggccagccaatgcgcccaattgacgcaagcgcacgctatgcaaacagcgcagctc
agtgccgcgaatgaacaattagcaacagcacaaatcgcgctgcagcaggccgagcagcag
cggcaagtcgccatagcccagcaggcgcaaatcgacattggcagcttgccagcgcaaaaa
gtgcaatggacgcagcggcgcgatgatttagccagcgcccagcaactggtgcagcgcatt
agcgaatacacggcgcagctgaataaattgctgcatcagcaagccatgcagcaagcggcg
caggcgcaaaccgagcaaaatttggcagtgctaacgcagcagcaaccgctgattgccgcc
accttggcgcaagctgagcgctcgctcaaatcggccgaagcggcgtgtaacagcaacgtt
gagtcgctacgcgatgcgctgcaagaggatgcaccttgccctgtctgcggtgcgctcgat
catccttacgtcagtgcaaatccgcagttgcaagcgatgttggccagcttgcaagccgaa
gtcgccacgcagcagcagcagcagcaacagcaattaagcttacacagccaattgaatgcc
gagcttgccaacatccagcgcgctttggccgagattcaccccgaaattacccgcatcacc
gcagagcgcgatgccttaaattcgcaatggcaaaaccatgctttactagccgaaattagc
gcaatgaatccggctgagcagcccgcatggtttgccgagcaacacaccgcattacaaaca
caagccagcgccatggccgcgcaagaagccgcatggcaacaggcgcagcaggccaaagac
agcgcgcaagcagcatttgagcaagccaaccaagcgcagcaaagccagaaagacgcggtg
caacaatgccaaagcgtattgcagcagatcgccacgcaacgtgctgccgcgcaacttgcc
gagcaagagcacgccgcgcgctgcgccgccagcttggcgcaattggcaccggctttacag
tttgacgctgcttggcaagcgcgctggcaggccgatccggcggtggagcaagcgcattgg
caacagcaagctcagctttggttggcgcagcacagcgcacacgcgagcggcctgcaaagc
accgccttactggcgcaaacggtggccggattactcgccgccgcacaacaaaccagcgcc
gagcagcagcgcttgcaagcgcaactcaatgccgagcaagccgcgctaagcgcattgcaa
tcggaacgacaggcgctgtttgccggacacagcgtagcgagtgttgaggcgcaattggcg
caagccttgaccagcgccaaagcgctgcaaaaccaagcccagctcgccgcacaatcggcc
gcgcagcacgtggttcgcgagcaagcggcgttggcccaagctcaagcgcagctgagccag
tggcaacaacaagcgcacagcgcgcagcagcaacttgatcaatggttggccgagcagggc
attgaactggcggtgttacgacaacatttggcattggatgccgcagggttagccagtgag
cgcgccgcgctattggcgctcgatacagcggtattgcacgcgcaaacggtattgcaagaa
cgctgtttgcaacagcagcatcaccaagcgcaacagcccgagctcgtcaacgctgaggac
ggcgccgcactggcgcaattgcaagcgcaggttgcagacatcagccgcgagcaagccgcc
gcgcaggcgaaagccgcgagcttgcagttacaactcgcccaagacgaagcgcgccgcagc
gccgccgccgatctgttgctagaaatcaccgcgcaagaaaccatccagcgccgctgggcg
caactgggtgatttaattggctcaagcgacggtaaaaaatttcgcaattacgcccagcaa
tacacgctggatgtgctgctcggctatagcaatcggcacttgcagcaactctcccgccgc
tatcgcttgcaacggattaacgacacgctggcgctgatggtgattgaccaagacatgggc
gacgaagcgcgctcggtgcattcgctctcgggtggcgaatcattcttggtgtcgctagcg
ctggcgctcggtttggcatcactctcatcgcagcgcgtgcgcgttgaatcgctatttatc
gacgaaggctttggcagcctcgacgccgacaccctcagcatcgccatggatgcgctcgac
ggcctgcaagcgctaggccgaaaagtcggcgtgatctcgcacgtacaagaaatgaccgaa
cgcatcgccagcaaaatcagcgtacaaaaaaccgccggcggtcgaagcgtgattagcgtg
atggaagggcggtga
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integrated database retrieval system
