Deefgea piscis: HQN60_12130
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Entry
HQN60_12130 CDS
T06622
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
dee
Deefgea piscis
Brite
KEGG Orthology (KO) [BR:
dee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dee03021
]
HQN60_12130 (nusA)
03009 Ribosome biogenesis [BR:
dee03009
]
HQN60_12130 (nusA)
Transcription machinery [BR:
dee03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HQN60_12130 (nusA)
Ribosome biogenesis [BR:
dee03009
]
Prokaryotic type
rRNA transcription factors
HQN60_12130 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
RNA_pol_A_CTD
KH_2
S1_2
KH_KhpA-B
zf-C4H2
Motif
Other DBs
NCBI-ProteinID:
QKJ67389
UniProt:
A0A6M8SXS6
LinkDB
All DBs
Position
2603037..2604509
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AA seq
490 aa
AA seq
DB search
MNREILVLVEALAHEKNVEKEVVFGALELALASATKKRYEEEVEIRVSIDRHTGAYRSFR
VWDVVEDNDHEEPSRQIAITDAPEYSADLSVGDVWEVELEPIEFGRIGAQAAKQVILQKI
RDAEREQNLNDFLQRREHIVSGSIKRIERGNAILELGKLEAILPRDQMIPKENLRVGDRV
KAFLLRIDRNGRGPQLVLSRIAPEFMAKLFELEVPEIENNLIELKGVARDPGMRAKIAVK
SNDQRVDPQGTCIGVRGTRVNAVSNELAGERVDIVLWSADAAQFAINALSPAEVSSIILD
EDTHSMDVVVDEDNLAMAIGRGGQNVKLAAELTGWKLNIMTVDEAEQKHEEEFTKIRALF
IQALDIDEDVADVLVQEGFNTLEEVAYVPLNEMLEIEAFDEETVNELRSRARDALLTQAI
AREEKLEHQSEDLKTLEGMTSELATVLAENDIHTRDDLADLAVDELTEMTGIDAETAKQL
IMKAREHLFA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtgaaattctagtgctggtcgaagcacttgcgcacgaaaaaaacgtggaaaaa
gaagttgtgtttggtgcgcttgagttggcgctcgcttctgcaaccaaaaaacgttacgaa
gaagaagttgagattcgcgtttcaattgaccgtcacaccggtgcttatcgtagctttcgc
gtatgggacgtggttgaagataacgaccacgaagaaccgtcgcgtcaaatcgcgattact
gacgccccagaatacagtgccgatttgtcggtgggtgatgtatgggaagtcgagttagag
ccgattgagttcggtcgtattggcgcacaagcggccaagcaagtgattttgcaaaaaatc
cgtgatgctgaacgcgaacaaaatttgaatgatttcttgcaacgtcgtgaacatattgtt
tcaggtagcatcaagcggattgagcgtggcaatgccattcttgagctcggtaagcttgaa
gctattttgccgcgcgatcagatgattccaaaagaaaacttgcgtgttggtgatcgcgtt
aaagcgtttttattacgtattgatcgcaatggccgtggcccgcaattggtcttgtcgcgg
attgcgccagaatttatggcaaaattgtttgaacttgaagtgccagaaattgaaaacaat
ttgatcgagctaaaaggcgtggcacgtgatccagggatgcgcgctaaaattgccgttaaa
tccaacgatcaacgtgttgatccacaaggcacttgtatcggtgtgcgtggtacacgggtt
aatgcggttagtaatgaattggccggtgaacgtgttgatatcgttttatggtcggctgat
gctgcccagtttgcgattaatgctttgtcacctgcagaagtgagctcaattattttggac
gaagacacccacagtatggatgtcgtcgttgatgaagataatttggcgatggccattggt
cgtggcggccaaaatgtgaaattagcggctgagttaacgggttggaaactcaacatcatg
accgttgatgaagcagagcaaaaacacgaagaagaattcactaagattcgcgctttgttt
attcaggcgctggatattgatgaagatgtagctgatgtcttggtacaagaaggcttcaat
acattagaagaggtggcctatgtgccactgaatgaaatgctggaaatcgaagcgtttgat
gaagaaaccgtaaacgaactgcgctctcgtgctcgtgatgccttgttaactcaagctatt
gcgcgtgaagaaaagctagagcatcagtccgaagacctgaagacgctggagggtatgacc
tcggaattagctactgtattggctgagaacgatatacatacccgtgacgatctagcagat
ttggcggtcgatgaattaaccgaaatgactggtatcgacgcagaaaccgctaaacaactg
atcatgaaagcgcgcgaacatttgttcgcctaa
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