Deefgea piscis: HQN60_12145
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Entry
HQN60_12145 CDS
T06622
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dee
Deefgea piscis
Brite
KEGG Orthology (KO) [BR:
dee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dee03016
]
HQN60_12145 (truB)
Enzymes [BR:
dee01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HQN60_12145 (truB)
Transfer RNA biogenesis [BR:
dee03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HQN60_12145 (truB)
Prokaryotic type
HQN60_12145 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QKJ67392
UniProt:
A0A6M8SQ69
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All DBs
Position
2607774..2608712
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AA seq
312 aa
AA seq
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MHCRKRQKKMAKRKIDGVLLLDKPFGFSSNGALLKCRWLLQAEKGGHTGVLDPFATGLLP
LCFGEATKFAQRMLDADKGYRATIRFGQMSTTLDGEGEISETGVAPADLAEIMPILAQFT
GPIEQTPPMYSALKVAGKALYEYAREGVVLERKSRPITIYEINVVSYDAPVLVVDVLCSK
GTYIRVLAEDIGNALGCGAYLSGLRRTLTGGFKLEDAITLDEYIAMDMPLREAKLLPAEQ
LIIELPSVQLNLSQTALMRNGMPILDLVKPPQGELRLYGLSEKSDNPVFIGLGEVGADGV
LRPKRLLSTHVG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcattgccgaaagcgccagaagaagatggccaagcgtaaaattgatggtgttttattg
ctagacaagccgtttggattttcaagtaatggcgctttgcttaaatgccgctggttatta
caggcggaaaagggcggtcatactggggtgttagatccttttgcaacgggtttgttgcca
ctctgttttggtgaggcgacaaagtttgctcagcgcatgcttgatgccgacaagggttat
cgcgcaacgatccgctttgggcagatgtcaacaacgctagatggcgaaggtgagattagc
gagacaggcgtagctcctgctgatctggcagaaatcatgccgattttggctcagtttacc
gggccaattgaacaaactcccccgatgtattcagcgctcaaggttgctggcaaagcgctg
tatgaatatgcccgtgaaggcgttgttttggagcgaaaatctcgccccattacgatttat
gaaatcaacgtcgtttcgtatgatgcgcctgtgttggtggttgatgtgttgtgttccaaa
gggacgtatatccgagtgttggccgaagatatcggtaatgctttgggttgtggtgcgtat
ttatctggattgcgtcgaactttgacgggtggttttaaactcgaagatgccattaccttg
gatgaatacattgcgatggatatgccacttcgcgaagcgaagttgctacccgctgagcaa
cttattattgagttgccaagtgtgcagctcaatctgtcacaaactgcactcatgcgcaat
ggtatgcctattttggatttggtcaaaccgccgcagggtgagttaaggctttacggactt
agcgaaaagtcggataatcctgtgtttatcggtttgggtgaagtgggcgctgatggcgtg
ctgcgacccaaacgactgctttctacccatgtggggtag
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