Deefgea piscis: HQN60_12215
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Entry
HQN60_12215 CDS
T06622
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dee
Deefgea piscis
Brite
KEGG Orthology (KO) [BR:
dee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dee03016
]
HQN60_12215 (truA)
Enzymes [BR:
dee01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HQN60_12215 (truA)
Transfer RNA biogenesis [BR:
dee03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HQN60_12215 (truA)
Prokaryotic type
HQN60_12215 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
CATSPERE_NTD1
Motif
Other DBs
NCBI-ProteinID:
QKJ67405
UniProt:
A0A6M8SQC5
LinkDB
All DBs
Position
2620399..2621190
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AA seq
263 aa
AA seq
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MALKRFAIAIEYDGRDFSGWQVQPQMDTIQGEMERAIGRMAGHPVRIHAAGRTDAGVHAT
RQIAHFDSDAQRPITAWVRGVNSFLPAGISVLWAQEVPEHFHARFVATARHYRYLLLRHP
IRPSLQAGRVGWVHYDLDIAQMRAAAQFLLGEHDFSSFRAAECQALSPIKHLQNIQITEH
GNMLCVDFSATAFLHHMVRNIMGALLYVGKGKASAEWMGWLLAQKNRTSAPPTFMPDGLY
LTGVSYPAEFELASLPEYRYGMI
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
ttggcgttgaaacgatttgccatagcgattgagtatgatggtcgtgattttagtggctgg
caggtgcagcctcagatggatacaatccaaggcgagatggagcgcgcaattggtaggatg
gccgggcatccggttcggatacatgcggcaggtcgtactgatgctggcgttcatgctaca
cggcaaattgcacattttgacagcgatgctcagcgtccaattaccgcatgggtacgcggt
gtaaatagttttttacccgcaggtatctcagtgctttgggcgcaagaagtgcctgagcat
tttcatgcccgatttgttgccaccgcacgtcattatcgctatctcttattgcgtcaccct
atccgtcctagtttgcaagctgggcgagtgggctgggtgcattatgatcttgatattgca
cagatgcgtgccgcggcgcagtttttgttgggcgagcatgattttagtagttttcgggct
gctgaatgtcaggcgctatctccgattaagcacttacaaaatattcaaattaccgagcat
ggcaatatgctgtgcgtcgatttctctgcgaccgcatttttgcatcatatggtacgaaat
atcatgggtgcgctgctctacgttggtaaaggcaaggcttctgcagaatggatgggctgg
ttattggcgcaaaaaaacagaacgtctgcaccgccgacatttatgcctgatggcctttat
ttgacgggcgtgagctatcctgctgagttcgaattggcttctctgccagaatatcgctac
ggaatgatttaa
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