Desulfovibrio sp. G11: CNY67_00290
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Entry
CNY67_00290 CDS
T05183
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
def
Desulfovibrio sp. G11
Pathway
def03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
def00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNY67_00290 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
def03019
]
CNY67_00290 (pnp)
03016 Transfer RNA biogenesis [BR:
def03016
]
CNY67_00290 (pnp)
Enzymes [BR:
def01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CNY67_00290 (pnp)
Messenger RNA biogenesis [BR:
def03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CNY67_00290 (pnp)
Transfer RNA biogenesis [BR:
def03016
]
Prokaryotic type
tRNA degradation factors
CNY67_00290 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
KH_2
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
ATD80035
LinkDB
All DBs
Position
complement(67150..69381)
Genome browser
AA seq
743 aa
AA seq
DB search
MSQDIFTPTRVTCQVGGKEIIIESGRMANQAHGEVWIQCGGTVVLVTVCSQPLEFDKGFF
PLTVEYSEKMYAAGRIPGSFFRREIGRPSERETLVARLIDRPIRPLFPKGLNEDVQVLAS
VISADQENESDVLALTGASAALMLSPLPFEGPVAGGRIARVGGQFVLNPTFEQQAQSDLN
IVFAASGDALTMVEGDARFISEDVIIEALEWGRLQILPLVEIQHKLRELCGKPKMNFTPH
QDDEALVACVHELALANGMEEALRVPEKMARKDARKAVKDKVMETLKADPAWAENEAALK
AVSDILGGLEKKLVRARIVNEGTRIDGRDTTTVRPIQIQTGLLPRAHGSALFRRGETKSL
VVATLGSSTDEQRMDSLTGDVTKRFMLHYNFPPFSVGEVKPVRVSRREIGHGALAEKSLR
PVLPADADFPFTLRVVAETMESNGSSSMAAVCGGSLSLMDAGVPVSAPVAGVAMGLIKEG
EKFIVLTDILGDEDALGDMDFKIAGTAEGVTGVQMDIKITGLTTEIMRTAMQQAREGRLH
ILEEMAKAIASPRKELSRYAPQHAEVFVNPDIIRLIIGPGGKNIKAITAATGASVDIEDS
GRVSIFAPTAEALEKAREMVSYYDQRPDLGKNYNAKVRKIMEIGAIVEVLPNVEALVHVS
QLDVNRVEQPGDVARLGEDMLVKVIEINGDRIRASRKAVLLEEQGHPWNPEDTARPQRSD
RGDRGDRRGDRGGRDRRDRGDRR
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagatatcttcacccccacccgcgtcacctgccaggtgggcggcaaggaaatc
atcatcgaaagcggccgcatggccaatcaggcccacggcgaagtgtggattcagtgcggc
ggcaccgtggtgcttgtcaccgtctgctcccagccgcttgaattcgacaagggcttcttt
ccccttaccgttgaatactctgaaaaaatgtacgccgccggacgcattcccggcagcttt
ttccgccgcgaaatcggccgcccgtccgagcgcgaaaccctggttgcgcgccttatcgac
cgccccatccgcccgcttttccccaaggggttgaacgaggacgtgcaggtgctggccagc
gttatttctgctgaccaggaaaacgagtccgacgtgctggccctcaccggcgcttcggcg
gccctcatgctttcgcccctgccctttgaaggccctgtggccggtggccgcatcgcccgc
gtgggcggccagtttgtgctcaaccccacctttgagcagcaggcccagagcgacctcaat
atcgtctttgccgcctccggcgacgccctcaccatggtggaaggcgacgcccgctttatt
tccgaagatgttatcatcgaggctcttgaatggggtcgcctgcagattctgcccctggtg
gaaatccagcacaagctgcgtgaactttgcggcaagcccaagatgaacttcacgccccac
caggacgatgaagccctcgtggcctgcgtgcacgagctggcccttgccaacggcatggaa
gaagccctgcgcgtgcccgaaaaaatggcccgcaaagacgcgcgcaaagccgtgaaagac
aaggtcatggaaaccctcaaggccgacccggcctgggccgaaaacgaagctgccctcaag
gccgtgtccgacatcctgggcgggcttgaaaagaagctcgtgcgtgcgcgcattgtcaac
gaaggcacgcgcattgacggccgcgacacaaccaccgtccggcccatccagatccagacc
ggtcttctgccccgcgcccacggctctgccctgttccgccgcggcgaaaccaagtctctt
gtggtcgccacccttggctcctccacagacgagcagcgcatggactccctcaccggcgat
gtcaccaagcggtttatgctgcactacaactttccgcccttctctgtgggcgaagtgaag
cccgtgcgcgtgtcccgccgcgaaatcggccacggcgccctggcggaaaagtccctgcgc
cccgtgctgcccgctgacgccgactttcccttcaccctgcgcgtggtggccgaaacgatg
gaatccaacggttcttcgtccatggctgccgtgtgcggtggttcgctgtccctcatggac
gccggcgtgcctgtgagcgccccggtggccggtgtggccatgggcctcatcaaggaaggc
gaaaagttcatcgttcttaccgatattctgggtgatgaagacgccctgggcgatatggac
ttcaagattgccggtactgctgaaggcgtcaccggcgtgcagatggacatcaagatcacg
ggccttaccaccgagatcatgcgcaccgccatgcagcaggcccgcgaaggccgcctgcat
atccttgaagaaatggccaaggccatcgcctcgccgcgcaaggaactttcgcgctacgcc
ccgcagcatgccgaagtgttcgtcaaccctgacatcatccgcctgatcattggtcccggc
ggcaagaacatcaaggccatcaccgcggccaccggcgcctctgtggacattgaagactcg
ggccgcgtgtccatcttcgcccccacggccgaagctctggaaaaagcccgcgaaatggtt
tcctactacgaccagcgccccgatcttggcaaaaactacaatgccaaggtgcgcaaaatc
atggaaatcggcgccattgtcgaagtgctgcccaacgtggaagcccttgtgcacgtgtcg
cagcttgacgtgaaccgcgtggaacaacccggcgacgtggcgcgcctgggcgaagacatg
ctggtcaaggtcatcgaaatcaacggcgaccgcatccgcgccagccgcaaggcggtgctg
ctggaagaacagggccatccctggaatcctgaagacaccgcccgcccgcagcgctccgac
aggggtgaccgtggtgacaggcgcggcgaccgcggcggacgtgaccgccgtgatcgtggt
gacaggcgctag
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