Desulfovibrio sp. G11: CNY67_00720
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Entry
CNY67_00720 CDS
T05183
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
def
Desulfovibrio sp. G11
Brite
KEGG Orthology (KO) [BR:
def00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
def03019
]
CNY67_00720
Messenger RNA biogenesis [BR:
def03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CNY67_00720
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Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
Cas3_HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
ATD80107
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All DBs
Position
complement(163544..164575)
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AA seq
343 aa
AA seq
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MEKGCYVKDISPTSEARGLFAVSQAAQGQSRNGPYWRLTLVDASGSLEAKIWHPLSADFS
EIPAGALAWVEGRAGLYRDQVQLTVEHMRLLDAAESAAVDQTALMPASPYPLDDMLHELD
GAIKAEFTHAPWRKLVQGFFSNAEMRAAFRVCPAAKGVHHAYVGGLLEHTLSVFNLCRRI
ADQYPELDRQTLLAGALFHDIGKLREFSGGLANDYTDEGRLLGHLMLGIEMLAPFMARSG
LEEPLQRHLKHLILSHHGELQFGAVRPPHTPEAMALHYADNLDAKMAQCRGLFAQMEEDG
QDWTPWQATLGRPVHRAARTPEKAAPATRKKAVKEECLSLLKV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggttgttacgtcaaagacattagccccacgtcggaagcgcggggcctgttt
gcagtcagtcaggcggcacagggccagtcccgcaacggaccctactggcggctcaccctg
gtggacgccagcggcagtcttgaagccaagatatggcaccccctcagcgcggacttcagc
gaaattcccgccggcgcgctggcgtgggttgaaggccgcgcaggcctgtaccgcgatcag
gtgcagcttaccgtggagcatatgcgcctgctggatgcggcagaaagcgccgctgtggac
cagaccgcccttatgcccgccagcccctacccgctggacgacatgctccacgaactggac
ggcgccatcaaggcagagttcacacacgccccctggcgcaagctggtgcagggctttttc
agcaatgccgaaatgcgggctgcctttcgcgtatgcccggcagccaaaggcgtacaccac
gcctatgtgggcggcctgcttgagcataccctgagtgttttcaacctctgccgccgcatt
gccgaccagtatccggaactggaccggcaaaccctgctggcgggagcgctctttcacgat
atcggcaagctgcgggagttttccggtggccttgccaacgattataccgatgaaggccgt
ctgctcggccatcttatgctgggcatagaaatgctcgctcccttcatggccagatccggc
cttgaagagccgctgcaaaggcatctcaagcaccttatcctgagccatcacggcgaactt
cagtttggcgcggtacgcccgccccacacccccgaagccatggccctgcactatgccgac
aacctggatgccaagatggcccagtgccggggccttttcgcacaaatggaagaagacgga
caggactggaccccctggcaggccacgctgggccgccccgtacaccgggccgcgcgcacc
ccggaaaaagccgcccccgcaacccgtaaaaaggcggtcaaggaagaatgtttgtcactt
ttgaaggtatag
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