Desulfovibrio sp. G11: CNY67_03140
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Entry
CNY67_03140 CDS
T05183
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
def
Desulfovibrio sp. G11
Pathway
def03420
Nucleotide excision repair
def03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
def00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CNY67_03140
03430 Mismatch repair
CNY67_03140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
def03400
]
CNY67_03140
Enzymes [BR:
def01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CNY67_03140
DNA repair and recombination proteins [BR:
def03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CNY67_03140
MMR (mismatch excision repair)
Other MMR factors
CNY67_03140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ATD80536
UniProt:
A0A807ZIW0
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All DBs
Position
699104..701032
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AA seq
642 aa
AA seq
DB search
MLDMSKLNANQREAVEWGNGPLLVLAGPGSGKTRVLTSRIAKILEESAGQHFRILALTFT
NKAAGEMRGRVEELVPAERGRVRLTTFHSYAAELLQQHGNHLKFRPDFQILSNDTDRIAL
LEDVLGGINKDWSNPLPEHFKAAQLLPVITRLLEACISTEGVEDFLQQTNVENAVPLARV
YVAYREALRSANVLDFPSLIAETLELLKKFPFLAKHIRKVYKHILVDEFQDTNKSQYQIL
AHIVRPDPSSLFVVADDDQILYEWNGANHLRFQELKHEFDVSILQLPENFRCPASVIELA
NALIVKNQNRAVGKKPLKAVKQGQSGDVVRVVHFDDLDDEAEWIARDILERPIEEQPHCA
VLARTNKLIESVGKKFSEMGVPAYFATRKNEFLSAPMRMLHSILRLANSKEDKQSLARLL
KAFYELEGIRIEQGQVISRASADGQDLLRAWLEEVKLRGDDIDERTRRLLQRDIKPLLES
LKFRDFADSLLAWGKECQAKLGPEEQVFNEFEEEQCVWKMLLADIVGKFSGEDVSLYQFL
HELDLSSKTPPKPENAIPCFTIHASKGMEFGHVYLMGMVEDQLPSWAAVKKGDDSSEMQE
ERRNCFVAITRAQDSLTMTYSDRVFNWNKHPSRFLGEMGFEL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacatgtcaaaactcaatgcaaaccagcgtgaagccgtggaatggggcaacggc
cctcttcttgtacttgcaggcccaggatcaggaaaaacgcgagttttgacctctcgaatt
gccaaaattttagaggagtcagctgggcagcacttccgtatactggctctgacttttacc
aacaaggccgctggtgaaatgcgtggcagagttgaggagttggttcctgcagagcgcgga
cgagtacgtctgacgacatttcactcctacgcggccgagcttttgcaacagcatggtaac
cacctcaagtttcgtccagattttcagattctttcaaatgatactgaccgtatagcgttg
ctagaagatgttctaggagggatcaataaagactggagcaaccctctcccggaacacttc
aaagccgcgcagcttttgcctgtcataacacgacttctggaagcatgtatctctacagag
ggcgttgaggactttttgcaacagacgaatgtggaaaatgccgtaccattggctcgcgtg
tatgttgcatatcgggaggcgttgcgaagtgcaaacgttctggattttccaagcttgatt
gcggaaacgcttgaactgttaaaaaaatttcctttcctcgctaaacatattcgtaaggtc
tacaaacatatacttgttgatgagtttcaagacaccaacaaatcacagtatcagatactg
gcgcatattgttcgtcctgatccgtcgtcgctattcgtcgtggctgacgatgaccagatt
ctttatgagtggaacggtgcaaatcatctacgattccaagagctaaaacacgaatttgat
gtctccatattgcagctcccagagaactttcgctgcccggcatctgtcatagaacttgcg
aatgccttgattgtaaaaaatcagaaccgcgcagtcgggaagaaacccctgaaagcggta
aagcagggccaaagtggcgatgtcgtccgtgtggtgcactttgatgaccttgatgatgaa
gcagaatggattgcacgtgatattttagaacggcctattgaagaacagcctcattgcgct
gttcttgcccgcaccaataaattaattgagtcggttgggaaaaagttttctgaaatggga
gtacctgcatattttgccacccgtaaaaatgagtttttaagtgccccaatgcgaatgctg
cactctattctgcgcctagcaaactccaaagaagacaagcaatcgcttgctcgactcctg
aaggcattttacgaacttgagggaatacgcattgagcagggtcaggttatttcccgagca
tctgctgatggccaggatttactgcgtgcatggctggaagaggtgaagcttcgcggtgac
gacatcgatgagcgcacacgccgactactccagagagacattaagccactcctagaatct
ttaaaatttcgtgactttgccgatagtttattggcctggggcaaagagtgccaagcaaaa
ctcggcccagaggagcaagtctttaatgaatttgaagaagagcaatgtgtatggaaaatg
ctacttgcggacatagttgggaaatttagcggagaggatgtgagcctctatcagttcctg
catgagcttgatttgtcatcaaaaacgcctccaaaaccggaaaatgccatcccttgtttt
accattcatgcttcaaagggtatggaatttggacatgtctacctcatgggcatggtggaa
gaccagttacccagttgggctgctgtcaaaaaaggtgatgattcttcagaaatgcaagaa
gaacgcagaaactgctttgttgccattacgcgcgcacaagacagtctgacaatgacctat
tctgaccgtgtatttaattggaataagcatccgtcacgatttcttggtgaaatggggttt
gagctgtaa
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