Desulfovibrio sp. G11: CNY67_03415
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Entry
CNY67_03415 CDS
T05183
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
def
Desulfovibrio sp. G11
Pathway
def03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
def00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CNY67_03415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
def03400
]
CNY67_03415
Enzymes [BR:
def01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CNY67_03415
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CNY67_03415
DNA repair and recombination proteins [BR:
def03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CNY67_03415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Ribosomal_S13
Auto_anti-p27
IBR_1
Motif
Other DBs
NCBI-ProteinID:
ATD80580
UniProt:
A0A807ZHU4
LinkDB
All DBs
Position
762870..763811
Genome browser
AA seq
313 aa
AA seq
DB search
MPELPEVETVARTLRPHVQDRIIADAQVLRPTSQHPLSLPLQDLRGCRIADVVRRGKLLL
LLLDPTEAEKTCVRGMQNLRLAVHLRMTGRLMTYAAKTSPGTHTRCILDLKALPAAAGGQ
AAAECGPAGGAGVPGAEDCLTSGERRLFFDDVRAFGTMLAGTPEMFARWPFWRELGPEPL
DITEAAFAASIAAKRSAIKAVLLDQKMLAGVGNIYADESLFAAGIDPRRKASELTRLQAD
RLLQCLRDVLLLSISQCGSSIRDYRDADGNVGAFQNIFAVYGRGGQKCKTCGSLLEKAKV
AGRSTVFCPQCQH
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgccggaagtggagactgttgcccgcaccctgcggccccatgtgcaggat
cgcattattgctgacgcgcaggttttgcgccccaccagccagcatcccctgagcctgccc
ctgcaggacctgcggggatgccgcatcgctgacgtagtgcgccggggcaaactgctcttg
ctgctgcttgacccaaccgaagcggaaaaaacgtgtgtacgcggcatgcaaaacctgcgt
ctggccgtgcacttgcgcatgacggggcgtcttatgacctatgcggcgaaaacgtcgcca
ggcacgcatacccgctgtatccttgatctgaaagcattgcccgccgccgctggcgggcag
gccgcggcggaatgtgggcctgccggaggagcaggcgtgcccggggctgaagactgtttg
acgtccggcgagcgtcgcctgttttttgacgacgtgcgcgccttcggaaccatgctggca
ggcacgccggagatgtttgcccgctggcctttctggcgggagcttggccccgagcctctg
gatattacggaagcggcctttgccgcaagcattgccgcaaaaaggtctgccatcaaggct
gtgctgctggatcagaaaatgctggccggggtcggcaatatctatgcggacgaaagcctg
tttgccgcaggcattgacccgcgccggaaagcttctgagctgacgcggcttcaggccgac
cgccttttgcaatgcctgcgggatgtgcttttactgtccatctcccagtgcggcagttcc
attcgtgattacagggatgccgacggcaatgtgggggcctttcagaatatctttgccgtg
tacgggcgcggcgggcaaaagtgcaagacttgcggaagccttctggaaaaggccaaagtg
gctggcaggagtacagttttttgcccgcagtgtcagcattag
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