Desulfovibrio sp. G11: CNY67_03845
Help
Entry
CNY67_03845 CDS
T05183
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
def
Desulfovibrio sp. G11
Pathway
def03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
def00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNY67_03845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
def03019
]
CNY67_03845
03009 Ribosome biogenesis [BR:
def03009
]
CNY67_03845
Enzymes [BR:
def01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNY67_03845
Messenger RNA biogenesis [BR:
def03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CNY67_03845
Ribosome biogenesis [BR:
def03009
]
Prokaryotic type
rRNA helicases
CNY67_03845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Flavi_DEAD
CMS1
Motif
Other DBs
NCBI-ProteinID:
ATD82698
UniProt:
A0A807ZMS4
LinkDB
All DBs
Position
complement(853422..855209)
Genome browser
AA seq
595 aa
AA seq
DB search
MTASFEELGLSRELLKAVEDMGFEEPSPIQVLAVPCLLAGNDAFGQAQTGTGKTAAFGLP
ILDKLTPERNTQALILCPTRELAIQVAEELNKLAAHKRGVAILPIYGGQPIERQLRALAK
GVQVVVGTPGRVMDHLKRGTLRLSQASMAVLDEADEMLDMGFREDIEAILEQTPASCQRV
LFSATVPPAIRELSKRFLREPEMLTVAQKMLTVPAIEQIYYEVRPHQKMDALCRLLDSRA
FHKALVFCSTKRGADEVTTHLQQRGYQSDSLHGNLAQSQRDRVMQRFRAEGLDVLVATDV
AARGLDVDDVDAVINYDIPHDVEKYVHRIGRTGRAGRVGSAFTFVTMREHYKMRDIIRCT
RARITEGRLPSLRDVDNIRTSRLLDEVRQTVESGTLERWLTLVEDFLATQFPDGEITSRD
VSAALFKLLMQRDFGDQDKPLDQDPLALEPRRQYKDRDGAPGRREPGKPGARPQRRENDG
PMTRLHLNVGHTHKATPRELVGAITGETGISSRHIGAISINKNFCVVEIAQEMADDVLAV
LNRGVFIAGMRVAAKVDSGKPAYPRPRKPFAPGPRRQAPGKYGKKGRNGPEEYYS
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatcttttgaagaattgggcttgtcccgcgaactgttgaaagccgttgaagac
atgggctttgaagagccttcccccatacaggttctggccgtcccctgcctgctggcaggc
aatgacgcctttggccaggcgcagacgggtaccggaaaaacagcggcttttggcctgccc
attctggacaagctcacgcccgaaagaaatacacaggcccttatattgtgccccacgcgt
gagctcgccatccaggtagccgaagaactgaacaaacttgccgcccacaaaaggggcgtc
gccattctgcccatttacggcgggcaacccatcgaaagacagttgcgcgctctggccaaa
ggtgtgcaggttgtggtgggtacgcccggccgtgttatggaccacctcaaacgcggaacc
ctgcgcctgagccaagccagcatggccgtgctggacgaagcggacgaaatgctggatatg
ggctttcgtgaagacattgaggccatcctggaacagaccccggcaagctgccagcgggtg
ctgttttcggccacggttcctccggccatccgcgaactgagcaagcgctttctccgcgaa
ccggaaatgctcaccgtagcccagaaaatgctcacggttccggccattgaacagatttat
tatgaagtgcgcccccaccagaaaatggacgccctctgccgcctgctggattcccgcgcc
ttccacaaggctcttgtcttctgctccaccaagcgtggcgcggatgaagtgaccacgcac
ctgcagcagcgcggctatcagtccgacagcctgcacggcaacctggcgcagtcgcagcgc
gaccgcgtgatgcagcgcttccgtgccgaaggactggatgtgctggtagccacagacgtg
gcggcgcgcggccttgacgtggacgacgtggacgccgtcatcaactacgacatcccccac
gatgtggaaaaatatgtgcaccgcatagggcgcacggggcgggcgggccgtgtgggcagt
gcctttacctttgtgaccatgcgcgaacattacaaaatgcgcgacatcatccgctgcacc
cgcgcacgcatcaccgaaggccgtttgccgagcctgcgcgacgtggacaatatccgcacc
tcccgcttgctggatgaagtgcgccagaccgttgaatccggcacgcttgaacgctggctc
accctggtggaagattttctggccacgcagtttcctgacggtgaaattaccagccgcgat
gtttctgctgcccttttcaagctgctcatgcagcgggattttggcgatcaggacaaaccg
ctggatcaggaccctctggctctggaaccccgccgccagtacaaggacagggacggcgcc
cccggcaggcgtgaacccggcaagcccggcgcacgcccccaacggcgcgaaaatgacggc
cccatgaccagactgcatctcaatgtgggccatacgcacaaggccaccccccgcgaactg
gtgggagccatcaccggcgaaaccggcatttccagccgccacatcggggccatcagcatc
aacaagaacttctgtgttgttgaaatagcccaggagatggcagacgacgtgctggccgtg
cttaacaggggcgtctttattgcaggcatgcgtgtggcggcaaaagtggacagcggcaaa
ccagcctaccctcgcccccgcaaaccctttgcccccggaccgcgccgtcaggcgcccggc
aaatacggcaagaaaggccgtaacgggccggaagagtactacagctaa
DBGET
integrated database retrieval system
