KEGG   Desulfovibrio sp. G11: CNY67_05030
Entry
CNY67_05030       CDS       T05183                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
def  Desulfovibrio sp. G11
Pathway
def03030  DNA replication
def03430  Mismatch repair
def03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:def00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CNY67_05030
   03430 Mismatch repair
    CNY67_05030
   03440 Homologous recombination
    CNY67_05030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:def03032]
    CNY67_05030
   03400 DNA repair and recombination proteins [BR:def03400]
    CNY67_05030
Enzymes [BR:def01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CNY67_05030
DNA replication proteins [BR:def03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CNY67_05030
DNA repair and recombination proteins [BR:def03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CNY67_05030
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: ATD80839
LinkDB
Position
1108235..1108765
AA seq 176 aa
MSDVSAPSCVAIDFETSGYAAHSACAVGLARIEDGRVTEQFYSLVRPPSSRVLFTEIHGL
TWPMLKNAPVFGDVWPQMESFMKGAGVLLAHNASFDRRVLLACCREAGAGVPEQHFLCTL
KGARRSLPLPSKKLNHVCEHFGIALEHHHAGSDAAACAEVYLHLRALGVTDSQMRI
NT seq 531 nt   +upstreamnt  +downstreamnt
ttgtctgacgtttccgccccgtcctgcgtggccatagattttgaaacatccggatatgcg
gcccacagcgcttgtgctgtgggccttgcacgcattgaagacggccgcgttacagagcag
ttttacagtcttgtgcggccgccttcttcgcgggtgctttttacagaaattcatggtctt
acctggcccatgcttaaaaatgcccctgtttttggcgacgtatggcctcaaatggaatcg
ttcatgaaaggggcaggcgtgctgctggcgcataatgcctcttttgaccggcgtgtgctg
ctggcctgctgccgtgaggctggggcgggtgtgccggagcagcattttctctgtacgctc
aagggcgcgcgccgcagcctgcctttgccctccaaaaagctgaatcatgtgtgcgagcat
ttcggcattgccctggaacaccatcatgcgggttctgatgctgcggcctgcgcagaggtt
tatctgcatctgcgggctttgggtgttaccgacagccagatgcgcatctag

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