Desulfovibrio sp. G11: CNY67_06170
Help
Entry
CNY67_06170 CDS
T05183
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
def
Desulfovibrio sp. G11
Pathway
def03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
def00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CNY67_06170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
def03400
]
CNY67_06170
DNA repair and recombination proteins [BR:
def03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CNY67_06170
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CNY67_06170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ATD81026
LinkDB
All DBs
Position
1371921..1373957
Genome browser
AA seq
678 aa
AA seq
DB search
MEDKLTTPFSLETAYAPTGDQPGAINELVANLQAGVPAQVLLGVTGSGKTFTMANVIARC
NRPALVLAPNKTLAAQLYGEFRALFPHNAVEYFVSYYDYYQPEAYVPASDTYIEKDSSIN
DNIDKLRHAATHALLTRRDVIIVASVSCIYGLGSPEYYAKMVVPVEVGQHFSMDRLITRL
VEVHYERNDYDFHRGTFRVRGDALEIIPAYHHERALRLEFFGDDIDSMREIDPLTGEVLA
DVSKTVIYPASHFVSAQDNLKRAAGDIRDELAERLTLFRQQGKLVEAQRLEQRTQLDLEM
IEELGYCNGIENYTRHLDGRVAGEPPSCLLNYFPEDFLLFVDESHITIPQVGGMYKGDRS
RKQTLVDYGFRLPSALDNRPLQFNEFTARLNQVVYVSATPGKYEMDQAQGIVAEQIIRPT
GLVDPVVEVRPTKGQMEDLLGECRGCVSRGERVLVTTLTKRMAEDLTEYCCNMGVRARYL
HSDIDTLERMQIIRALRLGEFDVLVGINLLREGLDIPEVSLVCILDADKEGFLRSTGSLI
QTFGRAARNVQGRVILYADKVTDSMKAAMSETARRRTRQTEYNEEHGITPVSTRKSLESP
LDSLYVEDGASRGRGKGRGKSKGQDADASPLTAEDTALLVARLEKEMRQAARDLEFEQAA
QLRDRIRVLRARLIVLPD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagttaaccaccccgttcagcctggaaaccgcctatgcgcctacgggtgac
cagcccggggccatcaatgaactggtggccaaccttcaggccggagtacccgctcaggtg
ctgctgggcgttaccggctcgggcaaaacgtttaccatggccaatgtcattgcccgttgc
aatcgcccggcgctggtgcttgcgcccaataaaaccctggcggcccagttgtacggtgag
ttccgcgcgctttttccccacaacgccgtagaatattttgtcagctattacgattattac
cagccggaagcctatgtgcctgcatcggatacctatattgagaaagattcttccatcaac
gataacatagacaagctgcgccatgccgccacgcatgccctgctgaccagacgcgacgtg
atcattgtggcctctgtttcatgcatctacggtcttggttcgccggaatattatgccaag
atggtcgttcctgttgaagtgggccagcatttttccatggacaggctcatcacgcggttg
gtggaagtgcattatgagcgtaatgactatgactttcatcgcggtacgttccgcgtgcgc
ggcgatgcccttgaaattattccggcctatcatcacgaacgcgccctgcggctggaattt
tttggcgacgatattgattccatgcgcgaaatagatcctctcacgggcgaggttctggct
gatgtgagtaaaaccgttatctacccggccagccacttcgtctccgcgcaggacaatctc
aagcgtgccgccggcgacattcgcgatgaactggccgagcgcctgaccctgttcagacag
cagggcaagctggtggaagcccagcgccttgagcagcgcacacagcttgatcttgaaatg
atcgaagagcttggctactgcaacggcattgaaaactacacccgtcatctggacggccgt
gtggcgggtgagccgccatcctgcctgctcaactattttcctgaggattttcttcttttt
gtggacgaatcgcatatcactatcccccaggtggggggcatgtacaaaggcgaccgctca
cgcaagcagacgctggttgactacggttttcgccttccctccgctctggataacaggccg
ttgcagttcaacgaatttacggcgcggctcaatcaggtggtttatgtgtcggccaccccc
ggaaaatacgagatggatcaggcacagggcatcgtggccgagcagatcatccgccccacg
gggcttgtggacccggtggtggaagtacgacccaccaaggggcagatggaagacctgctc
ggcgaatgccggggctgcgtgagccggggcgaaagggtgcttgtgactaccctgaccaaa
cgcatggccgaagatcttacagagtactgctgcaacatgggggtgcgggcccgctacctg
cactcggatattgatacccttgagcgcatgcagatcatccgtgccctgcgcctgggcgag
ttcgacgtgctggtgggcatcaacctgctgcgtgaaggactggatattcccgaagtttcc
ctggtctgcattctggatgcggacaaggaaggtttcttgcgttccaccggttcgcttatc
cagacatttggccgcgcagcccgtaacgttcaggggcgggtcatcctgtatgccgacaag
gtaacggactctatgaaggccgccatgagcgaaacggcgcgccgccgtacccggcagaca
gagtataatgaagaacacggcataacacctgtaagtacaagaaaaagccttgaatccccg
ctggatagtttgtatgtggaagatggcgcctcacgcgggcgcggcaaggggcggggtaag
agcaaagggcaggatgcggacgcaagcccgcttacggccgaagacacggccctgctggtg
gccaggcttgaaaaggaaatgcgccaggctgcccgtgatctggagtttgaacaggcggca
caattgcgtgaccgcatccgcgtcttgcgggcgcgtcttattgtattaccggattaa
DBGET
integrated database retrieval system
