Desulfovibrio sp. G11: CNY67_12955
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Entry
CNY67_12955 CDS
T05183
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
def
Desulfovibrio sp. G11
Pathway
def00541
Biosynthesis of various nucleotide sugars
def01100
Metabolic pathways
def01250
Biosynthesis of nucleotide sugars
Module
def_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
def00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CNY67_12955 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
def01005
]
CNY67_12955 (rfaD)
Enzymes [BR:
def01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CNY67_12955 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
def01005
]
Core region
CNY67_12955 (rfaD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
RmlD_sub_bind
KR
Motif
Other DBs
NCBI-ProteinID:
ATD82189
UniProt:
A0A807ZNC7
LinkDB
All DBs
Position
complement(2856715..2857695)
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AA seq
326 aa
AA seq
DB search
MYIVTGGAGFIGSAMIWRLNQAGITDILVVDNLGTTEKWKNLVNRRYARYVHRSEFLEML
HNDAIRGTIEAVIHMGACSSTTEKDADFLMSNNTAFTTKVCQFALERGARFINASSASTY
GDGSQGFSDELVNIRGLKPLNMYGYSKHLFDLWLLDNGLTDSVASLKFFNVYGPNEYHKD
SMRSVVCKAFYEIGSKGRMGLFKSDNPNYGDGGQMRDFVYVKDCVELMFWLITNPKANGI
FNVGTGKARTWNDLIKAVFSAMHREPCIDYVDMPETLKGKYQYFTQAEMDWLSEKNCPVK
FTSLENGVADYVRRYLSGDDPYLEMC
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcgtcacagggggcgcggggttcataggcagcgccatgatttggcgtctgaat
caggcgggcatcacggacattctggttgtagataacctgggcacaacggaaaagtggaaa
aacctggttaacaggcgttatgcacggtatgtgcatcgctcggaatttcttgaaatgctc
cataatgacgccattcgtggcacgattgaagctgttatacacatgggggcctgctcgtca
accaccgagaaggacgccgacttcctgatgtcaaacaatacggcattcaccacaaaagtc
tgccagttcgccctggaacgcggcgcgcgttttatcaacgccagttctgcctccacgtat
ggcgatggttcgcagggtttttctgacgaactcgtcaacattcgtggcctcaaaccttta
aacatgtacggttattccaagcaccttttcgacctgtggctgctcgacaatggcttaacc
gacagtgtagccagcctgaaattttttaacgtttacggccccaacgagtaccataaagac
agcatgcgtagcgtcgtatgcaaggctttttacgagatcggaagcaaggggcgcatgggc
ttgttcaagtcggataaccccaactatggcgacggcggccagatgcgggactttgtttac
gtcaaggactgcgttgaacttatgttctggttgatcaccaatccaaaagctaacggtatt
tttaatgttggcaccggtaaagcacggacttggaacgatctgatcaaagcagtgtttagc
gccatgcaccgcgaaccatgtattgactatgtggacatgcctgaaacgctgaaggggaaa
tatcaatacttcacccaagccgaaatggactggctgagcgaaaaaaattgtccggtgaaa
ttcacttcactagaaaatggggttgccgactatgtgcgccgctatctatccggtgacgat
ccttatctagaaatgtgttaa
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