Dehalococcoides mccartyi GT: DehalGT_0825
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Entry
DehalGT_0825 CDS
T01182
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
deg
Dehalococcoides mccartyi GT
Brite
KEGG Orthology (KO) [BR:
deg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
deg03016
]
DehalGT_0825
Enzymes [BR:
deg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DehalGT_0825
Transfer RNA biogenesis [BR:
deg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DehalGT_0825
Prokaryotic type
DehalGT_0825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ADC74191
LinkDB
All DBs
Position
complement(789253..790155)
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AA seq
300 aa
AA seq
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MDGILNINKPFGITSFDVVAKVRRIYSQKRVGHGGTLDPYATGVIPVFLGRSTRLIEYLS
SVSKTYLAEIELGVETDSYDSEGEITFRKTCDYVTREMIYKTLMDFQGEIIQIPPMYSAV
KHRGMRLYNLARQGIEVERIPRVATIYGIELLNYTSPVLRVQIECGHGTYIRSLAFDLGR
KLGCGAYLKSLVREAYGQFNLANSLDFADLEAAKCDGKLAGILLPLETAIGHLPRVSLDE
KNITRLVNGLEITLDRIDKPEAVAVYNAENSFVAIIQPETDGTWHPAKVFIRQSPKPDAN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcctgaatatcaacaaacctttcgggataacctcgtttgatgtagttgca
aaagtcaggcgtatttattcccaaaaaagggtagggcatgggggtactcttgacccgtat
gcaaccggagtaattccggtgtttttgggaagatctacccgtcttatagagtatctttcc
tccgtcagcaagacatatctggctgaaatagagctgggagtggagacggatagctatgac
agcgaaggcgaaatcactttccgcaaaacctgtgactatgttacccgtgaaatgatatat
aaaactttgatggattttcagggtgagataatccaaattccccctatgtatagtgccgta
aaacaccgcgggatgcgtctttacaatctggcaaggcaagggatagaggttgaaagaatt
ccccgggtagccacaatttatggcattgaactgcttaactacacttcaccggtactgcgt
gtacagatagaatgcggacacggcacatatattcgttctctggcctttgacttgggtaga
aaactgggttgcggggcgtatctgaaatctctggtaagagaggcatatggccagtttaat
ctggcaaactctctggattttgctgaccttgaggccgcaaaatgtgacgggaaactggca
ggtattctcctcccgctggagacagccattgggcatctgccaagagtttcccttgatgaa
aagaatataacccgcttggtaaatggtctggagataacactggataggattgacaaacct
gaggctgtggccgtatacaatgctgaaaacagtttcgttgctataatccagccggagact
gacggtacttggcatccggctaaagtcttcataagacaaagcccgaaaccggatgcaaat
tag
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