Dehalococcoides mccartyi CBDB1: cbdbA108
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Entry
cbdbA108 CDS
T00273
Name
(GenBank) putative helicase (Snf2 family)
Organism
deh
Dehalococcoides mccartyi CBDB1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
ResIII
ERCC3_RAD25_C
DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
CAI82372
UniProt:
A0A916KLJ9
LinkDB
All DBs
Position
97184..100285
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AA seq
1033 aa
AA seq
DB search
MGGTFSIDNSSGNTEFQVGQIVRLKSNPTVRGPVIAVTSRKKENLYTVFVNGETKMLYAS
QLQLEEGEKPEFQYLPLSRFHSYMTALQICHPSLSNLYSLNSARIDFIPYQFRPVFKFIR
SDRPRLLIADGVGVGKTIEAGLILQELQARRDIQSVLIICPRPLVMERKWQIEMRRFGEH
FTHLEGSTLRYCINEMDLEGIWPEQYKKSIISYSLFDEMLLFGPNGGNNRKRRKSLLTLD
PPPRFDLVIVDEAHHIRNTETYAHKAVRYFCDNAEAVLFLTATPIQLGSNDLFVLLNVLR
PDLIIDQKSFEHMAEPNPFINRAVAVTRSQQNEWEHEALVAIEEAASTAWGQSILKNSPD
FQRIRSRLLEGGIAPEERIALISDLEGLHTFSRIISRTRRRDIGEFTVRKPQTVSVEFTP
TQKALHDSLLEIQTEIFSRLHDDANVKFMMTTLRRQAGSCIYGLAPFIEDILTRHIGELP
LDESGEGEEVPDKDIVDKIKPLIKTLIEKANSLETFDPKLEALKKVIRDKLTLPNNKIML
FSSFRHTLAYIYKNLIAEGYRVGLVHGGTPDEERENIRDRFQLTGQDEKVIDVLLFSEIG
CEGLDYQFCDCMINYDLPWNPMRIEQRIGRIDRNGQKSETVAIFNMVTPGTIDAEIYERC
LLRIGVFKNSIGDNEEILGEISREIRAIAENFKLSESERQLKLQQLADNQIRLFQEQQKL
EEKQVELFGIKLPAEQFKKEVDEASSYWLLPSSIQGLVENYLQTLYEKDQEYKLGDKPIK
TLRVSQDVRNRLLQDFQNLPRQTSSLYREWESWLKGNTPNLPITFNANTVSGQPDAVFIT
PIHPLVRQAAGAFDIHVRALTCLRAKSEVVPAGIYHFVIYQWQFHGIRDDMVLCPVTELD
VLNKELIHLLATAEEPSNGNSYEAPDTQLMEDLDNRHYNLWFEACEKHKKRTRELAQHRR
ESLTTSHHARISLLNEYLEAASDEKIQRMRRSQIATAENDYTRHVKELDTAIERADITTQ
PVAFGILIIEKGE
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcaccttttcaatagataactcttctggaaataccgaattccaagttggtcaa
atagtccggcttaagtcgaatccgactgttcgaggtcctgtaatagccgttacctcgaga
aaaaaagagaacctttacactgtgtttgttaatggtgaaactaagatgctgtatgcatca
cagctacaattggaagaaggcgagaaacccgaattccagtatctaccactcagtagattt
cactcttacatgacagctctccaaatatgccaccccagtttgtctaacctttattctctt
aactcagcacgaattgattttattccttatcaatttcggccggttttcaaattcatacgt
tcagaccgtcctaggttactgattgcagatggtgttggagtcggaaagactattgaagca
ggactcatcctccaagaattgcaagcacgacgagatattcaatccgttctaatcatttgc
cctcgcccattagtaatggaacgcaagtggcagatagaaatgaggcgtttcggcgaacat
ttcacacatttagaaggctcaactctccgatactgtataaatgagatggatcttgaagga
atatggcctgaacaatataaaaaatcgataatctcatattcactatttgatgaaatgcta
ttgtttggtcccaatgggggaaataatcggaagcgtcgcaaaagccttttaacgcttgat
cccccaccgcgttttgatttagttatcgttgatgaagcacaccatataagaaatacagag
acttatgctcataaagccgtgagatacttttgtgacaacgctgaggcagttttatttctg
actgcaacaccgattcaactaggaagcaacgatttatttgttctcttaaacgtgctccgt
ccagatttaataattgaccaaaagtctttcgagcacatggcagagccgaacccatttatc
aatcgcgccgtcgccgtcacacgctctcagcagaatgaatgggaacatgaggctctggtg
gctatagaggaagcagctagtacggcatggggacagtccattctaaaaaatagccctgat
tttcaacgaataagatcaagattgttagaaggcggaattgcgcctgaagagcgcatagca
cttatttcagaccttgaaggcttgcataccttttcgaggattattagcagaacaagaaga
cgtgatatcggtgaattcactgtacgtaagccacagacggtttcagttgagttcacaccg
acgcaaaaagctctccatgatagtctacttgaaattcagacagagatatttagccgactt
cacgatgatgctaacgtaaagtttatgatgactactttgcgaagacaagcaggaagttgt
atttacggactcgcgccttttattgaggatattcttaccagacatatcggcgaacttccc
ttagacgaatccggtgagggcgaagaagtacctgacaaagacatcgtggataagattaaa
ccattaataaaaacacttattgagaaagcgaattctctcgaaacttttgaccctaaattg
gaagcgttaaagaaagtaatccgcgataagctaactcttcccaataataaaatcatgctg
tttagcagctttagacatactttggcttatatatataagaatctgatagcagaggggtat
cgtgtaggattggtacatggtggcacgcccgatgaagaacgcgaaaatattagggatcgg
ttccaactaactggacaagacgaaaaggttatagatgtactcttgttctcagagatcggt
tgtgaaggcttggactatcagttttgtgattgcatgattaattatgatttgccttggaat
ccaatgcgaatcgaacaacgaattggacgtatagatcgcaatggtcaaaaaagcgaaaca
gtggctatttttaatatggttacaccaggtacaatagacgctgagatatacgagcgttgt
cttttaaggataggggtattcaaaaactccataggagataatgaggaaatccttggagag
attagccgcgaaataagagcaattgctgagaatttcaaattaagtgaatcagaaagacag
ttaaaattacagcagcttgcagacaaccaaatacgcctttttcaagaacaacaaaagctg
gaagagaaacaagttgagcttttcggaataaagctaccagcagagcaattcaaaaaagaa
gtcgatgaagcatctagttattggcttctacctagctcaattcaaggcctagtcgaaaat
tatttacaaactttatatgaaaaagatcaggagtataagttaggtgacaaacctataaaa
acactgcgtgtttctcaagacgtacgaaatagattgcttcaagattttcaaaatcttcct
cgacagacttcttccctttatcgagaatgggagagctggcttaagggaaacactcctaac
cttcctattacttttaatgccaatactgtttcaggacagcctgatgcagtatttattaca
ccaatccatccacttgtccgtcaggcggcgggagcatttgatattcatgtccgtgctctc
acatgcctaagagccaaatccgaagtagttcccgccgggatttatcattttgtcatctac
caatggcaatttcatggtatccgcgatgatatggttttatgtcctgttacagaactagat
gtattgaataaagaattaatccatttgctggcaaccgcagaggaaccaagtaacgggaac
tcctatgaggctccagatactcaactgatggaggatcttgataatcgtcactacaactta
tggtttgaggcttgcgagaaacataaaaaacggacccgagagttagctcaacataggcgt
gaaagcttaacaaccagccatcatgcccggatttctcttctaaatgaatatctggaagca
gcttccgatgagaaaattcaacgaatgagacgctcccaaatagcgacagctgaaaatgac
tacacccggcatgtaaaagaactagatacagcaatcgagagagcagacattactactcag
ccagttgcctttggcattctaataattgaaaagggagagtag
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