Dehalococcoides mccartyi CBDB1: cbdbA1118
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Entry
cbdbA1118 CDS
T00273
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
deh
Dehalococcoides mccartyi CBDB1
Pathway
deh00220
Arginine biosynthesis
deh00240
Pyrimidine metabolism
deh00250
Alanine, aspartate and glutamate metabolism
deh01100
Metabolic pathways
deh01110
Biosynthesis of secondary metabolites
deh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
deh00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
cbdbA1118 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
cbdbA1118 (carB)
00220 Arginine biosynthesis
cbdbA1118 (carB)
Enzymes [BR:
deh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
cbdbA1118 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_3
GARS_A
ATP-grasp_5
ATP-grasp_4
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
CAI83214
UniProt:
A0A916KMT1
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Position
905604..908873
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AA seq
1089 aa
AA seq
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MRKQKGICEVMNKPKKVLIIGSGPIIIGQAAEFDYAGTQACKAMREEGVESILVNSNPAT
IMTDENVADRVYIEPLTVESITKIIEKERPDGLLPTLGGQTGLNLAVDLADAGVLAKYNV
RSLGTPINTIRTAEDRELFKELLTKIGEPVPPSETVTTAEDALRVAHMIGLPVVIRPAYT
LGGTGGGFAHNWDEVEEVAQTGLNASPIHQILVEKSVAGWKEIEYEVMRDGADNCITICN
MENFDPMGVHTGDSIVVVPVQTLTNKESQMLRTASIKIIRALGIEGGCNVQLSLNPNGNE
YYVIEVNPRVSRSSALASKATGYPIARVASKIAIGKRLDEIPNTVTGKTLACFEPAVDYI
VAKIPRFPFDKFALGDRGLGTQMKATGEVMAIDRSFEAAIHKSIRSLEFGKKTVLWEDRS
WIMGDDLSTYPLHAHDTRLWTILAALRRGHTPEAIHEKTMVDNWFLYKLKNITDMEKRLL
KENLTPLLMLEAKQMGFSDEEIATLSGKLAEQVRQTRLEWNIKPVFKMVDTCAAEFDAAT
PYFYSTYEDENEAIPQNVKKAVVIGSGPIRIGQGIEFDYCSVHAAWALEKAGLQSIMINS
NPETVSTDFDTSNRLYFEALDEESVRDILENENISAPESTPSIVQFGGQTAINLAAPLTR
SSNPIIGSSAEAIDLAEDRRRFERLLSEMGIPQAPGAGITSLDEALSIADSIGYPVVVRP
SYVLGGRAMEIVSDASDLVRYMSAAIELNTGHPILIDKYLVGKEVEVDAIADGETVFIPG
VMEHIERAGVHSGDSMAVYPTQNLNEHDLATITDYTIRIGKALNVRGLMNIQFVVSKDPE
GGDNIVYVLEVNPRGSRTVPFLSKVTGVPMVDIAVNVMLGKTINEQGYQNGIMPNTDLVA
IKAPVFSMAKLVGVDTYLGPEMKSTGEVMGVDHTFNKALVKTLQAASIMLPETGTLLFSI
ADRDKAEALPLIRTLHGLGYNFYATEGTAAMITAAGITVKQISKKLDEGHPNIVDIIRNG
TVCGVINTMTGGRVPLRDGFYIRRAAAERKVPCFTSMDTAKAAVEALANGNRQITVLPLN
EYRQGKSGS
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaagcaaaaaggaatatgcgaagtgatgaataaacccaagaaagttcttattatc
ggctccggccccattatcatcggacaggcagccgaatttgattacgccggtacccaggcc
tgcaaagccatgcgtgaagaaggggtggaatccatactggtaaactccaacccggctact
attatgactgacgaaaatgttgcggacagggtatatattgaacccttgaccgttgaatct
ataaccaaaatcattgaaaaagaacggccggacggtttgctgcctactctgggcggacaa
accggacttaatctggcggtagatctggcagacgcaggcgtgcttgccaagtacaacgtg
cgttcactgggtacacccataaataccatccgcaccgccgaagaccgcgaactttttaaa
gaattgctgactaaaataggcgaacctgttcctccttcggaaactgtgactacagccgaa
gacgcactccgtgttgcccatatgataggcctgccggtggtaatacgcccggcctatacc
cttggcggcaccggcggcgggttcgcccataactgggatgaagttgaggaagtggctcaa
acaggcttgaatgcctcacccatccaccagatactggtggaaaagtcggttgccggctgg
aaagaaattgaatacgaagtaatgcgtgacggggcagacaactgcataactatctgcaat
atggaaaactttgacccgatgggggtgcataccggagacagcattgtagttgtgcccgtc
cagacccttaccaacaaagagtcccagatgctccgcaccgcttccatcaagataatacgg
gcattgggtattgaaggcggctgtaacgtacaactttctctaaacccgaatggcaacgaa
tattatgtaattgaggttaatcccagagtatcccgttcatcagccctagccagcaaggcc
accggttaccccattgcccgggtggcttccaagatagccattggcaaacggctggatgag
ataccaaacaccgttaccggcaaaactctggcctgttttgagcctgccgtagactatatt
gtagctaaaatcccccgcttcccctttgacaaatttgcacttggagaccggggcttaggc
acgcagatgaaagccaccggggaagtcatggccattgaccgcagttttgaagcggctatc
cacaaatccatccgctctctggagttcggcaagaaaaccgtactctgggaagaccgcagc
tggataatgggagatgacctttccacctatccccttcatgcccatgatacccgcttgtgg
acaatactggccgctctccgccgcgggcatacacccgaagctatccatgaaaaaacaatg
gtagataactggtttttatacaaactgaaaaatattaccgacatggaaaaacgcctgctt
aaggaaaatctgacccccctgcttatgcttgaagccaaacaaatgggtttttcagatgaa
gaaatagccaccctgtcaggcaaactggccgaacaggtcaggcagacaaggctggaatgg
aatataaaaccggtattcaaaatggtggacacctgtgccgccgaatttgatgccgccact
ccatatttctactccacctatgaagatgaaaatgaagctatcccccagaatgttaaaaaa
gcagtggttataggttcgggccctatccgtataggacagggaatagagtttgactactgc
tcggtgcatgccgcttgggctttagaaaaggccggtttgcagagcattatgataaactcc
aaccccgaaacggtctcaacagattttgatacctcaaaccgtctgtattttgaagctctg
gacgaagaaagtgttcgggatattctggaaaatgaaaacatatccgcacccgaatccact
cccagcattgtccagttcggcgggcagacggctataaacttggctgctccccttacccga
agcagcaatcccatcatcggttcatcagccgaggctatagatctggccgaagaccgccgc
cgttttgaacgcctgctatccgagatgggcattcctcaagcaccgggggccggcataacc
agtctggacgaggctctcagcatagccgacagtattggctacccggtggtagtccgccca
agttacgtactaggtggacgggctatggaaatagtcagtgatgcatccgaccttgtacgc
tacatgagcgccgccatagagctgaataccggacaccccatactgatagataaatatctg
gtgggcaaggaagtggaagtagacgccattgcagacggggaaaccgtgtttatccccggc
gttatggagcatattgaacgggcaggcgtccatagcggagactccatggcagtttacccc
acccaaaacctgaatgaacatgatttggcgaccattacagactatactattcgcatcggc
aaagccctgaacgtacgcgggcttatgaatatccagtttgtagtctccaaagaccccgaa
gggggagataatatagtatatgtactggaggtaaatcccagaggctcacgaactgtccct
ttcctctcaaaagtaacgggcgtacccatggtggacatagctgtaaacgttatgctgggt
aaaactataaacgaacagggctatcaaaacggcattatgcccaatacggatttggtagcc
ataaaagcccctgtcttctccatggcaaagctggtgggggtggatacctaccttgggccg
gaaatgaaatccaccggtgaagtaatgggagtagaccacaccttcaataaagctctggta
aaaaccttgcaggcggcatctataatgctgcccgaaacaggcactctcctattcagcata
gctgaccgtgacaaggccgaagccctgccccttatccgtaccctgcatgggctgggatat
aatttctatgctaccgaaggcactgccgccatgataaccgccgccggtataacagttaag
cagataagcaagaaactggacgagggtcaccccaatattgtggatattatccgtaacggc
acagtctgcggagtgataaataccatgaccggtggcagagtacccctgcgggacggtttt
tatatccgccgggcagccgccgaacgcaaagtgccttgctttacctctatggataccgcc
aaagccgctgtggaagccctggcaaacggcaaccgccagataacagtcttgcccttaaat
gaataccgccagggcaaaagcggcagttag
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