Dehalococcoides mccartyi CBDB1: cbdbA1328
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Entry
cbdbA1328 CDS
T00273
Name
(GenBank) ribosomal large subunit pseudouridine synthase,RluD subfamily
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
deh
Dehalococcoides mccartyi CBDB1
Brite
KEGG Orthology (KO) [BR:
deh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
deh03009
]
cbdbA1328
Enzymes [BR:
deh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
cbdbA1328
Ribosome biogenesis [BR:
deh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
cbdbA1328
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
FHA
FliMN_C
RelA_RIS
Motif
Other DBs
NCBI-ProteinID:
CAI83382
UniProt:
A0A916NVR6
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All DBs
Position
1053829..1054731
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AA seq
300 aa
AA seq
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MKTFKLVAETAGERLDKYITQKESGLSRSFIQELVSSGHILVNNQSAKPSLRLKTGDTIT
IEIPPETPSELKAEDIPLEIIFQDKDLLLINKPPGLTVHPAPGHPDHTLVNGVLALEPEM
EDFDDPLRPGIVHRLDKDTSGLLLVAKNRQALANLSAQFKERTIRKYYLALVKGELRPAE
GFIEAPLGRDPQNRQKIAVVSDGRHARTGYKVLRYIQGYSLLEVKLETGRTHQIRVHFAA
IGHPVAGDAVYGQKESWVKRQFLHAHRLSFALPSNGQVVEFTSPLPPDLEEALKILETPS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacgtttaaactggtagccgaaactgccggcgaaagactggataaatatattacc
caaaaggaatcagggctttcccgcagttttattcaggaactggtgagttcaggtcatata
ctggtaaacaaccagtctgccaaacccagcctgaggcttaaaaccggcgatacaataact
atagaaatccctcccgaaaccccctctgaacttaaagccgaagatataccgctggaaata
atctttcaggataaagacctgttgcttataaacaagcctcccggacttaccgtacatcct
gcccccggtcaccctgaccacacactggtaaacggggtattggcactggaacctgaaatg
gaagattttgatgaccctcttcgccccggaatagtccaccgtctggataaagatacctcc
ggactgctgctggtagctaaaaaccgtcaggcactggccaacctgtctgcccagtttaaa
gaacggaccatacgcaagtactatctggcactggtaaaaggtgaactgcggcctgccgaa
gggtttattgaagcccctctggggcgtgacccccaaaaccgccagaaaattgcagtggtg
tctgacgggaggcatgcccgtaccgggtataaagtactgcggtatattcagggatacagc
ctgcttgaagtcaaacttgaaaccggccgtacccaccagatacgtgtccattttgccgcc
ataggccacccggtggcaggtgatgcagtttacggccaaaaggaatcctgggtaaaacgg
cagttccttcatgcgcaccgccttagctttgccctgccttcaaacgggcaggtagtggag
ttcacctcccctcttccgccggatctggaagaagccctgaaaatactggaaaccccctcc
tga
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