Dehalococcoides mccartyi CBDB1: cbdbA1344
Help
Entry
cbdbA1344 CDS
T00273
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
deh
Dehalococcoides mccartyi CBDB1
Pathway
deh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
deh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
cbdbA1344 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deh03400
]
cbdbA1344 (mutM)
Enzymes [BR:
deh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
cbdbA1344 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
cbdbA1344 (mutM)
DNA repair and recombination proteins [BR:
deh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
cbdbA1344 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
FANCI_HD1
DUF6185
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
CAI83395
UniProt:
A0A916KNL0
LinkDB
All DBs
Position
complement(1066005..1066817)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETVKNEIMPHLLGKKIIRMEALWAKTLCPPEADFNALASGTCVTGLSRRGKYI
IISLSSGLFISVHLKMSGGLTAIRAENGQAPRFTRAIFHLENGEQVYFTDIRKFGRITLL
AGLDSVLEKLGPEPLEETFTAGVFWHRLSGRKGPIKAVLLDQKVLAGVGNMYADEALFKA
CLNPLRSAESLSMAEVERLHSAIQSVLHKAIQNKGASVSTYHRPDGSKGGAQLEFNVAHR
RGESCPVCGAPITRQLIRQRACYFCPRCQS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcctgaagttgaaacggtaaagaatgaaataatgccccatttgctgggt
aaaaagataatccgcatggaagctttgtgggccaaaactctttgcccgcccgaagcggat
tttaacgcactggcatcaggtacatgtgtaaccgggctgagccgccgtggcaagtatatt
atcattagcctgagcagcgggttatttatcagtgtccacctgaaaatgagcggcggactg
acggcaatcagggctgaaaacggtcaagccccccgctttaccagagccattttccatctg
gaaaatggagagcaggtatattttaccgatatacgcaaattcgggaggataaccctgctt
gccggtttggactctgttttagaaaaactggggcctgaacctctggaggaaacttttacc
gccggtgtattttggcatcgtctctcagggcgcaaaggacctataaaagcggtactgctt
gaccagaaggtactggctggggtgggcaatatgtacgcagatgaagccctgtttaaagcc
tgcctgaacccgctccgttcggctgaaagcctgagtatggcagaggtggaaagactgcat
tcagctattcagtcagttttacataaagctatacaaaacaagggggcaagtgtcagcacc
tatcatcgccctgacggctcaaagggcggtgcccagctggagtttaatgttgcccatcgc
aggggcgaatcttgcccggtttgcggtgctcccataacccgccagctgatacgccagcga
gcctgttacttctgtccccgttgccagtcctga
DBGET
integrated database retrieval system
