Dehalococcoides mccartyi CBDB1: cbdbA1728
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Entry
cbdbA1728 CDS
T00273
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
deh
Dehalococcoides mccartyi CBDB1
Brite
KEGG Orthology (KO) [BR:
deh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
deh03032
]
cbdbA1728 (gyrA)
03400 DNA repair and recombination proteins [BR:
deh03400
]
cbdbA1728 (gyrA)
Enzymes [BR:
deh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
cbdbA1728 (gyrA)
DNA replication proteins [BR:
deh03032
]
Prokaryotic type
DNA Topoisomerases
cbdbA1728 (gyrA)
DNA repair and recombination proteins [BR:
deh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
cbdbA1728 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
CAI83726
UniProt:
A0A916KNN1
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All DBs
Position
complement(1384559..1386988)
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AA seq
809 aa
AA seq
DB search
MVTGNTRPINIEDEMKGSYLDYAMSVIVSRALPDVRDGLKPVQRRILYAMNDLGMKHNTP
YKKSARIVGEVLGKYHPHGDSSVYDAMVRMAQPFSYRYPLVDGQGNFGSVDNDPAAAMRY
TEARLAQIAEHLLADIDKNTVDFMPNFDSSLEEPTVLPARIPNLLMNGSSGIAVGMATNI
PPHNLAELCQAICYLIDNPDCGVDELMQFVSGPDFPTGGTILGTDGIKSAYATGKGKIVI
QAKAHIGEVETRKAIFVTEIPYQVNKAELVAKIAELVKERKVTGISDLRDESDRQGMRVV
IELKRDAEPQQVLNSLYKHTNMRTSFFVNMLALVDGQPQVLSLKEVLKNFIDFRHLIITR
RSQFELKAAKDRAHILEGLKKALDFIDRIIAIIRGSENGDAARKNLIAEFDFSVVQAQAI
LDLQLRRLANLERQKILDEYAELMKRIGYLEDLLSHPEKIYALVKEDAKDLKSSYGQPRA
TEISNQGVIEFRVEDLVPHMDVIVTLSERGFIKRVPANVFRLQHRGGTGIMGMPTREADA
VRFLSVSDTHDTLLFFTNRGKVFSLRCFDIPDDSSRIAKGTAIVNLIPVTQDERITAILD
LKSFPADHFLLMATNKGEIKKTSLQEFTAVRSSGLIAMDLTASDELVAAVETIEEKDILL
ATRLGQSIRFPVSELRTSLRASGGVKAIVLSMEDEVVSMDVAQEGTMVITVTENGAGKLT
AIEEYPQQHRAGSGVINFKVVDKTGEVVASKVVSVTDQMMLISADGMVTRTQVKEEDPSH
GIPIMGRATQGVRVMRLEEGDRVVAVATF
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaggtaataccaggccgataaatatagaagatgaaatgaagggctcatacctt
gattacgctatgagtgtaatagtctcgcgtgccctgccggatgtgcgtgacgggcttaag
ccggtacagcggcgcatcctctatgccatgaatgacctgggtatgaaacacaataccccc
tataaaaagagtgcccgtatcgtgggtgaagttttaggtaaataccatccccacggtgac
tcttctgtttatgacgccatggtacgcatggcccagcccttttcttatcgttacccgctg
gtggacggtcagggtaactttggcagtgtggacaacgaccccgcggctgccatgcgttac
accgaagcccgtttggctcagatagccgaacatctgctggcagatatagacaaaaatacc
gtagacttcatgcccaactttgattcctcgctggaagagcctactgttctgccggcccgc
atacctaacttgctcatgaacggcagttcgggtattgcggtgggtatggctaccaatata
cctccccacaatctggccgaactctgccaggctatttgttacctgatagataaccctgat
tgcggggtggacgaactgatgcagtttgtttccggaccggactttcctactggcggtact
atactgggtactgatggcataaagagtgcctatgctactggtaaaggcaagattgttatc
caggccaaagcccatattggcgaagtggaaacccgcaaggctatatttgttaccgagatt
ccttatcaggtaaacaaggccgaattggtggctaagattgccgaactggtcaaggaacgc
aaagtgaccggtatttccgacctgcgtgacgaatctgaccgccagggcatgcgggtagtt
attgaactaaagagggatgccgaaccccagcaggttttaaacagcctttacaaacatacc
aatatgcgcacctctttttttgtaaatatgctggcgttggtagatggacagccgcaggtt
ctcagcctgaaagaagtacttaaaaacttcatagatttccgccatcttattatcacccgc
cgaagccagtttgaacttaaagccgccaaagaccgtgcccacatattggaaggtcttaaa
aaagcgctggattttattgatcgtatcatcgccattatccgcggctccgaaaacggtgat
gccgcccgtaaaaacctgatagccgaatttgatttctcggtagtacaggcccaggctatt
ctggatttgcagcttcgccgtctggccaatctggaacgccagaagatactggatgaatat
gccgaacttatgaaacggataggttatctggaagacctgctgtctcaccctgaaaagatt
tatgctctggtgaaggaagatgccaaagaccttaaatccagctatggccaaccccgtgcc
accgagatttctaaccaaggtgttatagaattccgggtggaagacctggtgccccatatg
gatgttatagttaccttaagtgagcgcggctttatcaaacgggtaccggctaacgtattc
cgtctgcagcatcgcggcggtaccggcataatgggtatgcccacccgcgaagcagacgct
gtccgtttcctgtcggtttcggatacccatgataccctgctcttctttaccaaccggggc
aaggtattcagcctgcgctgttttgatatacctgatgattcctcccgtatcgccaagggt
acagctatcgtaaacctgatacctgttacccaggatgaacggataaccgccatactggat
ttgaaaagcttcccggcagaccatttcctgctgatggctaccaataaaggtgaaatcaag
aaaacctccctgcaggagtttacagccgtccgttcctccggcctgatagccatggatctg
actgcttctgatgaactggtagcggcggtagagaccatagaagaaaaagatattctgctg
gctacccgtctgggtcaatccatccgcttcccggtgagtgaactccgcaccagtctcagg
gcttccggcggtgtcaaggctatagtcctctccatggaggacgaagtggtcagcatggac
gttgcccaagagggaacgatggtaataaccgtaaccgaaaacggtgccggcaagctgact
gccatagaggaatatccccagcagcaccgggctggcagcggggttataaacttcaaggta
gtagataaaaccggtgaagtggttgcctccaaggtagtcagtgtaactgaccagatgatg
cttatttcagccgatggcatggttacccgtacccaggtcaaggaagaagacccctcacat
ggcatacccatcatgggcagagccactcagggtgtgagggtaatgcgtcttgaagaaggt
gacagagtggttgcggtagctactttttag
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