Dehalococcoides mccartyi CBDB1: cbdbA508
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Entry
cbdbA508 CDS
T00273
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
deh
Dehalococcoides mccartyi CBDB1
Pathway
deh00300
Lysine biosynthesis
deh00470
D-Amino acid metabolism
deh01100
Metabolic pathways
deh01110
Biosynthesis of secondary metabolites
deh01120
Microbial metabolism in diverse environments
deh01230
Biosynthesis of amino acids
Module
deh_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
deh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
cbdbA508 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
cbdbA508 (lysA)
Enzymes [BR:
deh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
cbdbA508 (lysA)
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Ortholog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CAI82698
UniProt:
A0A916KM01
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All DBs
Position
408204..409508
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AA seq
434 aa
AA seq
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MEPRIQVFPKNTEVKNNHLIIGGVDVAGLCAKYGTPLYIFDELTIRQNCRDFKREFSRRY
ADSSISYASKAFLHPALLKILAEEGMSLDVVSGGELSVANNAGFPMDMVYLHGNNKSAEE
LRLALRLHVGRIVVDSFDEIKLLSKLADESGHIPDILLRITPGVDAHTHQHITTGKLDSK
FGFPLFQAAEAVGLAMAQASLNLVGFHFHIGSQIFETQPFLDAIDLVLDFAAQVQERYGF
DIEELDIGGGYGVQYEVDKPAPPISAYAEAIGAKVVSKCRSLKLTPPSLNIEPGRAIIAQ
AGVALYTVGVIKDIPGIRLYASVDGGMGDNIRPALYEAKYEAVVANNVQSAEKEKVTIAG
KFCESGDILIRDIELPSLRTGDILAVPCCGAYCLPMSSNYNGYHRPAVVMLKNGEDRLIR
RRETVEDLSRLDSV
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaagaatacaggtattccccaaaaacactgaagtaaaaaataatcatctgatt
atcggcggggtagatgttgccgggctttgtgccaaatatggcacgccgctgtatattttt
gacgaacttaccatccgtcagaattgccgtgatttcaagcgtgagttttcacgccgctat
gcagacagctctatcagctatgcttcgaaagcctttttgcatccggctttgcttaaaata
ctggctgaagaaggcatgagtctggatgtggtttccggcggagagctctccgttgccaac
aacgccggttttcctatggatatggtttatttgcacggaaacaacaaatctgccgaagaa
ctaaggctggcacttcgtctgcatgtggggcggattgtggtagacagttttgatgaaata
aaactcctgtcaaaactggcagatgagagcgggcatataccggatatattactcaggata
actcccggagtagatgcccatactcatcaacatattaccaccggcaagctggattccaaa
tttggtttccccctgtttcaggcagctgaagcggtaggtttagctatggctcaggccagc
ttaaatctggtaggtttccatttccatatcggttcccagatatttgaaacccagcccttc
cttgacgctatagatctggtgctggattttgccgcacaggtgcaggaacgttatggtttt
gatatagaggaactggatattggcggtggctacggcgttcagtacgaagtagacaagccg
gcacctcccatatctgcttatgcagaggctatcggagccaaagtggtatccaaatgccgc
agtttgaagctgactcctcccagtctgaatatagaaccgggacgggccattatagctcag
gcaggtgtggctttatatacggtaggggtgataaaagatattcccggcattcgtttgtat
gcctcggttgacgggggcatgggggataatatccgcccggctctttacgaggctaaatat
gaggcagtggtggcaaataacgtccagtcagctgaaaaggaaaaggtaactatagccggt
aagttttgcgaatccggcgatatacttataagagatattgaactgccttccctcaggaca
ggtgacatactggcagttccctgttgcggggcttactgtctgcctatgtccagcaattac
aatggttaccatcgcccggcggtagtaatgctgaaaaacggtgaagaccgcctgatacgg
cggcgtgaaaccgtggaagaccttagccgtctggattcggtctaa
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