Dehalococcoides mccartyi CBDB1: cbdbA524
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Entry
cbdbA524 CDS
T00273
Name
(GenBank) putative exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
deh
Dehalococcoides mccartyi CBDB1
Brite
KEGG Orthology (KO) [BR:
deh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deh03400
]
cbdbA524
DNA repair and recombination proteins [BR:
deh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
cbdbA524
Archaeal homologous recombinant proteins
cbdbA524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_29
SbcC_Walker_B
AAA_21
Rad50_zn_hook
PKcGMP_CC
AAA_15
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CAI82713
UniProt:
A0A916KM09
LinkDB
All DBs
Position
complement(423948..426527)
Genome browser
AA seq
859 aa
AA seq
DB search
MIPVKLKIKNFMCYRGEIPPFSFNGIHTACICGQNGAGKSALIDAITWALWGKSRAKSDD
DVISLNEQEAEVSLDFEISGELYQVIRQRQRPKKAGANGQSLLSLFSLQDEKPRNITGDT
LTQTEKKIISILHMDYDTFINSAFLRQGHANQFTQQPPGKRKEVLANILGLEIYDQLEDL
ARQAVREAEAKNLQIEQSIEDGKESLKSRPELEEALNHTRKDLAEGEGKLKIQLAELEIM
RHKKHSFDTKQNACRQLDNDLKDISKDQSRWIQTLQEIKQRISTFETLSAQKEAIFKGFQ
EYSACQSLYDKHNRILAKLRQLENTKKPLEDAVYKEENNLKNTLGKYQERLKFRQDTAQT
LGILEKEKTQSDQLKTRLETEEAELKIQQNKLLNLQSSLARLETEHAVAVKEVNALEEKL
NLLAEAGENRCNCPLCETELGQDKLKLVFGKYKTEQDTQKNLQADLQEKLSQMQSDIQAL
LKYIETETNRLSHSHKQYERQISLLDKGIAEAKEAEIKAAEGRNLIAGIEKQLNERSYAA
AEQASLAVVEKEIQGLNFDNAEYTRNQQNLADLTPFEEKKRKLDEALNRLPLENDSLKKA
SSALAELTARRDNKLNEQQTLLKELAELPVLEKELGEAETEYKSLSQRQDDLRQQLGSLS
QKAEQINELEKKLKKQAQEKDQTTQEINYFGKLVRAFGKKDGIQTMLIEDTLPELENGAD
LLLSRMTDGRMHLSIETQRSTKKGDQTETLDINISDELGTRNYETFSGGEAFRIDFAIRI
ALSHLLANRLGAPLRTLIIDEGFGTQDTTGIERLKEAINSIQNEFDKILVITHIDDLKDS
FPTRIEIDKTPSGSAIRLN
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtcaaactcaaaataaaaaactttatgtgttaccggggcgaaataccgcct
ttttcttttaacgggatacatactgcctgtatctgcggtcaaaacggggcaggcaaatcc
gccctgatagatgccattacctgggcgctctggggaaaaagccgggctaagagtgacgat
gatgtgatttccctaaacgagcaggaagcagaagtcagccttgattttgaaatttcaggt
gaactttatcaggttatccgccagcgccaacgccccaaaaaggcaggggcaaatggacaa
agcctgttaagccttttttcactccaggatgaaaaaccccggaatataaccggagacacc
ctgacccagactgagaaaaagataatctccatactccatatggactatgacacctttata
aacagcgcctttctgaggcagggacatgccaaccagtttacccagcaaccccccggcaaa
cgtaaagaagtgctggccaacatactggggttagaaatatatgaccagctggaagatttg
gccagacaggctgtacgtgaagcagaagccaaaaacctgcagattgaacagagtattgaa
gatggcaaagaaagtctgaagtccagaccggaactggaagaagccctaaatcatacccgt
aaagacctggccgaaggtgaaggcaaattaaaaattcagcttgccgagctggaaattatg
cggcacaagaaacatagctttgacaccaaacaaaatgcctgccgccagttggataacgac
ctgaaggatatttccaaagaccagtcccgctggattcaaaccctgcaagaaataaaacag
cgtatcagcacttttgaaacactctctgcccaaaaggaagcaatctttaaaggttttcag
gaatactccgcctgccagagcctgtatgataaacataaccggatactggctaaactaagg
caactggaaaataccaaaaaaccccttgaagatgccgtttacaaagaagaaaacaatctt
aaaaataccttggggaaatatcaggaacgcctgaaattcaggcaagacactgcgcaaact
ctggggatactggaaaaagaaaaaacccaatcagaccaactgaaaacccggttggaaact
gaagaggcggaactgaaaatccaacagaacaagctgcttaatctgcaaagcagcctggcc
agactggaaactgaacacgccgttgccgtcaaagaggtaaacgcacttgaagaaaaactg
aacctgctggctgaagcgggtgaaaaccgctgtaactgccctctatgcgaaactgaactg
ggacaagacaagctcaagctggtgtttggcaaatacaagacggaacaggatacccaaaaa
aacctgcaagcagatctgcaggaaaaactgagccagatgcaatcagatatacaagccttg
cttaagtacattgaaaccgaaactaaccgcctgagtcatagccacaaacagtatgaaaga
cagataagtctactggacaaagggattgcggaggctaaagaggctgaaataaaggcggcg
gaaggcagaaacctgattgcaggtattgagaaacaactgaacgaacggagctatgccgct
gcggagcaggccagtctggcagtagtcgaaaaagaaatacagggactaaattttgataat
gccgaatatacccgaaaccagcagaatctggctgatttgaccccttttgaagaaaagaaa
cgtaaacttgacgaagcacttaaccgcctgccgctggaaaatgacagtctaaaaaaggca
tcctctgcactggcagagctgacagcccggcgtgataataaactaaatgaacagcagacc
ctgcttaaagagctggcggaattaccggtgcttgaaaaagaactgggagaagccgaaact
gaatataagtcactcagtcaaaggcaggatgacctgaggcaacaactgggttcactcagc
cagaaagcagaacagataaatgagctggagaaaaagctgaaaaagcaagcacaagagaaa
gaccagaccactcaagaaataaattatttcggtaaactggtcagagctttcggcaaaaaa
gacggaatccagactatgcttattgaagacaccctgcctgaactggaaaacggagctgac
ctgttgctgtcgcgtatgactgacggccgcatgcaccttagcatagaaacccagcgttcc
accaaaaagggagaccaaaccgaaactctggatataaatatctcggatgaacttggcacc
cgcaactatgaaacctttagcggcggtgaggctttcaggatagattttgcgatcaggatt
gccctgtcacacttgctggcaaaccgtctgggcgcacctttgcggacacttatcattgat
gagggatttggcacacaggacactaccggcattgagcgcctgaaagaggccataaactct
attcagaacgagtttgacaagatactggtcataacccatatagatgacctgaaagattca
ttccccacccgcattgagatagacaaaaccccatccggctcagctatccgcctaaactaa
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