Dehalococcoides mccartyi CBDB1: cbdbA554
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Entry
cbdbA554 CDS
T00273
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
deh
Dehalococcoides mccartyi CBDB1
Pathway
deh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
deh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
cbdbA554 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
deh01007
]
cbdbA554 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
deh03016
]
cbdbA554 (serS)
Enzymes [BR:
deh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
cbdbA554 (serS)
Amino acid related enzymes [BR:
deh01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
cbdbA554 (serS)
Transfer RNA biogenesis [BR:
deh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
cbdbA554 (serS)
Prokaryotic type
cbdbA554 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
FlxA
Motif
Other DBs
NCBI-ProteinID:
CAI82738
UniProt:
Q3ZWY0
LinkDB
All DBs
Position
complement(449918..451159)
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AA seq
413 aa
AA seq
DB search
MLDLKFIRENPELVRKAVADRNTDAPIDEILELDNSRRNLTQELDNLRAKRKIMAKQRDE
TAIEEGRVLRGQISTLESELSQVDEKLTDRLLRVPNIPDPSVPVGKDESENVVLYYRGEK
RNFSFTPKPHWELGEALDIIDFDRGIKLSGSRFYILKGAGARLQRALIAFMLDLHTRKHD
YTEIYPPYMIKRECLVASGNLPKFADNLYHDAEEDYWWVPTAEAPLTNLHRDEILSAEQL
PIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFAELEKMVADAEEIA
DALKIPYRLKQLVTADISFGSAKSYDIEMYSPGVDEWLEVSSCSNCTDFQGRRANVRFRR
TSEAKPEFVHTLNGSGLALPRVMISVIENYQQPDGSIVIPEVLRPFMGVDVIR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatttgaaatttataagagaaaatcctgaactggtacgcaaggcagtggcagac
cggaataccgatgcccccattgatgaaatactggaactggataacagccgccgtaacctc
actcaggaattggataaccttcgtgccaaacgcaaaataatggccaaacagagggatgag
accgccattgaagaggggcgggttttacgcgggcagataagtacacttgagtccgaactt
tcacaggtagatgaaaagctgactgaccgattgctcagagtacccaatattcctgacccg
tctgtgcctgttggtaaagatgaaagcgaaaatgtagtcctttattacaggggagaaaaa
cgcaatttcagtttcactcccaaacctcattgggaactgggtgaagccctggatattata
gactttgaccggggtatcaaactttcgggttcacgtttctatatcttgaaaggcgcgggt
gcccgccttcaaagagcccttattgcctttatgttagacctgcatacccgaaaacacgat
tataccgagatctaccccccctatatgataaaaagagagtgtctggtagcttcgggcaac
ctgcccaaatttgctgacaatctctatcatgacgcagaggaagactactggtgggtgcct
accgctgaagcccccttaaccaatctgcaccgtgatgaaatactctccgcagagcagttg
cccattcattatgtagcctacaccgcctgtttccgccgtgagaaaatgtccgccggcaag
gatgtacgcggcattaagcggctgcatcagtttgacaaggttgaactctataaatactgc
aaaccggaagattcttttgccgaactggaaaagatggtggcagatgcggaagaaatagca
gacgccctcaaaataccctaccgccttaaacagctggtcaccgctgatataagcttcggt
tcagccaagtcttatgatattgaaatgtattcacccggagttgacgaatggctggaggtt
tcatcctgttccaactgcacagactttcagggcaggcgggctaatgtccgcttccgccgc
acctccgaagccaaacccgaattcgtccacaccctgaacggatcaggtctggccctgccc
agagtgatgatatcggttatagaaaactatcagcaaccggacggaagcattgtaattcct
gaagtactccgcccgtttatgggagtggacgttatccgctag
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