Dehalococcoides mccartyi CBDB1: cbdbA60
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Entry
cbdbA60 CDS
T00273
Symbol
holA
Name
(GenBank) DNA polymerase III delta subunit-related protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
deh
Dehalococcoides mccartyi CBDB1
Pathway
deh03030
DNA replication
deh03430
Mismatch repair
deh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
deh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
cbdbA60 (holA)
03430 Mismatch repair
cbdbA60 (holA)
03440 Homologous recombination
cbdbA60 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
deh03032
]
cbdbA60 (holA)
03400 DNA repair and recombination proteins [BR:
deh03400
]
cbdbA60 (holA)
Enzymes [BR:
deh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
cbdbA60 (holA)
DNA replication proteins [BR:
deh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
cbdbA60 (holA)
DNA repair and recombination proteins [BR:
deh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
cbdbA60 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
CAI82325
UniProt:
A0A916KLD8
LinkDB
All DBs
Position
39161..40195
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AA seq
344 aa
AA seq
DB search
MNLLYIFTGSDDFSLKERLKQIKQALGDESLASANTTLLEAKNLTAAELLNYVQTIPFLA
PARLVIVNGLLERFEGAKGKTAAKDTANKNSPDEFARALDNLPPTTLAVLLDYTTAKDGD
YREKEKVSALATNPLFKIIGSRAEVKHFAPLSAQNLPGWVMQRAKQSSIQMSVPAARLLG
RLAGPDLWALSTEIEKLGLYAQGRVIEEADVQAMVGYAQEVNIFSLVDAILDCKVKEAQQ
SLAAFTAGGGSPGFLLFMLVRQLRLMVRYTALKKRGLKEAEVFKVMGGSEYALRKTASQA
VCQNMDSLKNIYTKLLETDLYIKTGRFEPELALSLLVAELCGRK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttgctgtatatttttaccggcagtgatgatttttccctgaaagaacgcttgaag
cagataaaacaggctttgggtgatgagtctttggcttcggccaataccactctgctggaa
gctaaaaacctgacggctgccgaacttttaaattacgtacagactattccctttttagct
cctgcccggctggttatagtgaacggactgctggagaggtttgagggtgcaaagggcaaa
actgccgccaaggataccgcaaacaaaaacagccctgatgagtttgcccgggcactggat
aatctgcctccgacaactctggcggtgcttttggactatactactgccaaagatggtgac
taccgcgaaaaagaaaaagtgtccgctttggcaaccaacccccttttcaaaataataggc
agccgtgccgaggttaagcattttgcacctctttctgcccaaaacctgcccggttgggta
atgcagcgtgccaaacaatcttctatccagatgtctgttccggctgcccgtttgctgggc
cgcttggcggggcccgatttgtgggcactttctaccgagattgaaaaactgggattgtat
gcacaggggcgggtgatagaggaagcagatgtgcaggctatggtgggctatgctcaggaa
gtaaatatattctctctggtggatgctatactggactgtaaggttaaagaagcccagcag
tctctggcggcttttactgctggcggcgggtcacccggttttctgctcttcatgctggta
cgccagcttcggctgatggtgcgttatactgcccttaaaaaacggggattgaaggaagca
gaggttttcaaggttatgggtggttcggaatacgccctcaggaaaacggcctctcaggct
gtatgccagaatatggacagccttaaaaatatttacactaaactgcttgagacagacctc
tatataaaaaccggccgctttgaaccggagctggccttgagtttgctggttgccgaactt
tgcgggagaaaatag
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