Dehalobacter sp. CP: AAH944_00025
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Entry
AAH944_00025 CDS
T11158
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
deha Dehalobacter sp. CP
Brite
KEGG Orthology (KO) [BR:
deha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
deha03032
]
AAH944_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
deha03400
]
AAH944_00025 (gyrB)
Enzymes [BR:
deha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AAH944_00025 (gyrB)
DNA replication proteins [BR:
deha03032
]
Prokaryotic type
DNA Topoisomerases
AAH944_00025 (gyrB)
DNA repair and recombination proteins [BR:
deha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AAH944_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
XOF55155
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Position
4298..6202
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AA seq
634 aa
AA seq
DB search
MNPGSDYNAGQIEVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSIDEAMAGYCDEI
EVIIHQGESITVQDNGRGIPVDMHAKMQKPAVEVALTVLHAGGKFNNEAYKVSGGLHGVG
MSVVNALSVNLRVEIKKDGKKYSQEYSRGKTLTELKEIGMYQGRSGTMITFQPDPEIFED
IVYDYEVLAHRLKELSFLNKNVMITLIDERNEAKDVYNHNNGLIDFVEYLNKNKDPIHQK
AIVFETEKDNTKVEIALQYNESYTETLFSYANNINTTEGGTHEAGFKAALTRVVNDYARK
NNILKGNENNLSGEDVREGLTAIISVKIMEPQFEGQTKTKLGNSEVRSIVDSVVGEGLST
FFEENPAVAKKIVEKGLQATRARLAARKARDLTRRKSALESTSLPGKLADCTWKDPRYCE
MYIVEGDSAGGSAKQGRNQKFQAILPLRGKILNVEKARLDRILGNAEIRAMITALGTGIS
EDFDIEKARYHKVVIMTDADVDGAHIRILLLTFFYRFMKPLIDNHYVYIAQPPLFKIKNG
KQIQYAYNDQELSKVLDTVGREKTEIQRYKGLGEMNPEQLWETTMDPESRTMLVVQMEDA
MKADELFTMLMGDKVEPRKEFIQKYGKDVRNLDV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccggatctgattataatgccggccagatagaagtacttgaaggattagaagct
gttcgtaagcgtcccggtatgtacatcggttccactagcagccgtggtttgcaccatctg
gtttatgagatcgttgacaatagcatcgatgaggctatggctggttactgcgatgaaata
gaagttattattcatcagggagagagtattactgttcaagataatggacgcggcataccg
gttgatatgcatgcaaagatgcaaaagccggcagtagaagttgctttgacagtattgcat
gccggcggaaaatttaataacgaggcttataaggtctctggtggcctgcacggagtcggt
atgagcgttgttaatgcgctttccgttaatttgcgtgtcgagatcaaaaaagatgggaaa
aagtacagccaggaatattcccgcggcaaaacactgacggaactcaaggaaatcggtatg
taccaaggaagatccggaacgatgattactttccagcctgatccggaaatcttcgaagat
atcgtttatgactatgaagttctggcgcatcgtttgaaggagctttcatttctgaataaa
aatgtcatgattactctgattgacgagcggaacgaggccaaagatgtctataatcacaat
aatgggctgattgattttgtagaatatttaaataaaaataaagatccgattcatcagaaa
gcgattgtatttgagacggagaaagataatacaaaggttgagatcgcccttcagtataac
gaaagctataccgaaaccctgttttcttatgctaataatatcaatactacagaaggcggc
acgcatgaagcaggttttaaagctgctttaaccagggtagtgaatgactatgcgcgcaaa
aacaatattttaaaaggcaatgagaataacttaagtggtgaggatgtcagagaaggcctc
acagctattatttcggttaaaataatggaacctcagtttgaaggacagacgaagaccaag
ctgggcaatagtgaagtaagatccattgtcgatagcgtggttggcgaaggtttatccacc
ttttttgaagaaaatccggccgttgccaaaaagattgttgaaaaaggcttgcaggctacc
cgagcaaggcttgctgcccgcaaggccagagacctcacgcgcagaaaaagtgcgctggaa
agtacttctttgccgggtaaactggctgactgcacctggaaagatccaaggtactgtgaa
atgtacattgttgaaggagacagcgccggcggctcagccaaacaaggaagaaatcaaaaa
ttccaggcaattctgccgttgcgtggaaaaattctgaacgtcgaaaaagcccgcttggac
aggatcctgggaaatgcagaaatcagagcaatgatcacagcgcttggtaccggaatatct
gaagattttgatattgaaaaagcccgttatcataaagttgtaattatgacagatgctgat
gtcgatggagcacatattagaattctcttactgacattcttttacaggtttatgaaacct
cttattgataatcattatgtatatattgctcagccgccgctttttaaaattaaaaacgga
aaacaaatacaatatgcttataatgatcaggagcttagcaaagttcttgataccgtcggc
agagaaaagacagaaattcaacgctataaaggtctaggtgaaatgaatcccgaacagctt
tgggagacaacgatggatccggaatcccggaccatgctcgtggtacaaatggaagatgcc
atgaaagcggatgagttgttcacgatgctgatgggtgataaagtggagcctcgcaaggaa
tttattcaaaaatatggcaaggatgtacgaaatctggatgtttaa
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