KEGG   Dehalobacter sp. CP: AAH944_00625
Entry
AAH944_00625      CDS       T11158                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
deha  Dehalobacter sp. CP
Brite
KEGG Orthology (KO) [BR:deha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:deha03032]
    AAH944_00625
   03036 Chromosome and associated proteins [BR:deha03036]
    AAH944_00625
   03400 DNA repair and recombination proteins [BR:deha03400]
    AAH944_00625
DNA replication proteins [BR:deha03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AAH944_00625
Chromosome and associated proteins [BR:deha03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AAH944_00625
DNA repair and recombination proteins [BR:deha03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AAH944_00625
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 DUF2267 HU-CCDC81_euk_1 HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: XOF53808
LinkDB
Position
129384..129656
AA seq 90 aa
MNKAELVAAVAEKTEFTKKDAEKAVAAVFDTISQAMASGEKVQLVGFGTFEVKKREERVG
RNPQTKEEIVIPACKVPGFKAGKALKESVQ
NT seq 273 nt   +upstreamnt  +downstreamnt
ttgaataaagcggaactcgttgctgcagtagcagaaaagaccgaattcaccaagaaggat
gccgaaaaagcggtagccgcagtctttgacacaatcagtcaagcaatggcaagtggtgag
aaagtccaattagttggttttggtacatttgaggttaagaaaagagaagagcgtgtcggt
agaaatcctcagacaaaagaggaaattgtcattcccgcatgcaaagtacctggctttaag
gcaggaaaagctttaaaagagtcagtacagtaa

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