Dehalobacter sp. CP: AAH944_03175 Help Entry AAH944_03175      CDS       T11158                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism deha  Dehalobacter sp. CP Pathway deha02020   Two-component system deha02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:deha00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     AAH944_03175 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     AAH944_03175 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:deha03021]     AAH944_03175 (rpoN) Transcription machinery [BR:deha03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      AAH944_03175 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_CBD Sigma54_DBD Sigma54_AID 2Fe-2S_thioredx HTH_23 HTH_Tnp_ISL3 HTH_3 Sigma70_r4 HTH_Crp_2 Focal_AT Xre-like-HTH LacI HTH_IclR Motif Other DBs NCBI-ProteinID:  XOF54271 LinkDB All DBs Position 634772..636157 Genome browser AA seq 461 aa AA seqDB search MRQIRQDIFLEQQQRLFMTTELRQAISVLQMSTLELSEYITKKIEENPFLDEDEPVAENN EVVSKTATRVNMDDLIEHFSSDSNMGHIWNEKNENDTGYEQYLSDRPSLYEQLELQLNLE IKNPADIIIGNFLIGSIDRNGYFTTELEYVSQKLNVAVERVEEVLKVIHTFYPTGVGARN LQECLLLQMRANGKDSELAEQVIQNYFQELADKKIMKIANTLSVSTKQVQEVYDLIRTLD PKPGLQFGAERNPFIWPDVTIMRDQNDYMVIVNDFDFNYLRINQTYVDILRNSNALSDDV KKYLEEKFDSALGLIRGIEQRRLNIYKVVQSIVDIQREFFDNGIEYLKPLTMSQVADLVG IHESTVSRVTCNKYVQTPRGLFALKYFFNSGVGSYDCDKISSKSVKHLIQDIINKEDPNQ PLSDQDIMMMLVNKGMRISRRTVNKYRQSMGIPTNLHRKRY NT seq 1386 nt NT seq  +upstreamnt  +downstreamnt atgaggcagatacgccaagatatatttcttgaacagcaacagagattgttcatgaccact gaactgcgtcaggcaatttctgtattgcagatgtcgactctggaactaagcgagtatatc acaaaaaaaatagaagagaatccttttctggacgaagatgaacctgttgctgaaaacaat gaggttgtcagcaaaactgcaacccgggttaatatggacgacctgattgaacatttcagc agcgacagcaatatgggtcatatctggaatgagaagaatgaaaatgacaccggatacgaa caatatctgtctgatcggccaagtttatatgagcagcttgaattacaattgaatttagag atcaaaaatcctgcggatattatcattggaaactttctgataggaagtattgatcggaac ggctattttacaacagaactggaatatgtcagccaaaaattgaatgttgccgttgagaga gtggaagaggtcctaaaggtcattcatactttctatcctaccggcgtaggtgcccgaaat cttcaggaatgcctgcttctgcaaatgagagcaaacggcaaggatagtgagcttgcggaa caggttattcaaaactacttccaggagcttgccgacaaaaaaataatgaaaatagccaat accctctccgtgtctacgaagcaggtccaagaagtctatgatcttatcaggacgcttgat cccaaacccggactgcagtttggcgctgaaagaaatccttttatttggcctgatgttacg attatgagagaccagaacgattatatggttattgtaaacgactttgattttaactatttg agaatcaatcagacgtatgtggatattctccgtaattcgaatgcgttatctgatgatgta aaaaaatatcttgaagaaaagtttgattccgctttgggactcatccgcggaattgaacaa agaagactgaacatttacaaagttgtgcaaagcattgttgatattcaaagagaatttttt gacaatggcattgaatatctgaagcccttgaccatgagtcaggttgcggacctggtcggc atccatgaatctacggtaagccgggtcacctgcaacaaatacgttcagacgccgcgcgga ctgtttgctttgaagtatttctttaactccggtgtgggttcttatgactgcgacaaaata agttccaaaagtgtcaaacacttgatccaggatatcattaataaagaagacccgaaccaa ccactgagcgaccaggatattatgatgatgcttgtgaacaaagggatgaggatctcccgg agaactgtcaacaagtaccgtcagagtatggggatacctacaaatttacaccgtaaaaga tattaa

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