Dehalobacter sp. CP: AAH944_04105
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Entry
AAH944_04105 CDS
T11158
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
deha Dehalobacter sp. CP
Pathway
deha00300
Lysine biosynthesis
deha00470
D-Amino acid metabolism
deha01100
Metabolic pathways
deha01110
Biosynthesis of secondary metabolites
deha01120
Microbial metabolism in diverse environments
deha01230
Biosynthesis of amino acids
Module
deha_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
deha00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AAH944_04105 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AAH944_04105 (dapF)
Enzymes [BR:
deha01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AAH944_04105 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
XOF54448
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Position
819523..820359
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AA seq
278 aa
AA seq
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MDFVKMHGLGNDFICLDHFLFQTGMDYAETAVQLCHRQFGVGGDGLIVILSSDVADARMR
IFNPDGSEPEMCGNGIRCFAKYVYEAGYVQRDSLKIETLAGVLNVKLEICRGAVHHVTVN
MGEPCLDPVKIPVLAGTDTALNQKLEVAGQEYIFSAVSMGNPHCIIFTEDLELLPFETLG
RAIEKHPLFPRKTNVEFVKVNNSGEITVKVWERGVGPTLACGTGACASVVASVLAGRTGR
TVIVHLPGGDLKIEWQEGQQVHMTGPAVCVFRGSTLES
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtgaaaatgcatggtctgggaaacgattttatctgcctggatcattttctt
tttcagacaggtatggattatgccgaaaccgctgtccagctttgccacagacagttcggc
gtcggcggtgacggtcttattgtgattctgtcttccgatgtagccgatgcaaggatgagg
atatttaatccggacggttctgaaccggagatgtgcggcaatggcatacgctgttttgcc
aaatatgtttatgaagccggttacgttcagagagattcgcttaagatagaaacgttggct
ggagttctgaatgtcaaactggagatctgccggggagctgtacaccatgttacggttaac
atgggcgagccgtgtcttgatcccgttaagatacctgttttggccggaacggatactgca
cttaaccaaaaacttgaggttgccgggcaagaatatattttttcggcggtatcgatggga
aatccgcattgtattatttttaccgaggatttggaattgcttccatttgaaacgctgggc
cgtgcgatcgagaaacacccgctgtttccgagaaaaacaaatgtggagtttgtcaaagta
aacaattcaggtgaaataaccgtcaaggtgtgggaacgcggagtcggcccaacgctagcc
tgcggaacgggagcctgcgcatctgtggttgcatcagtactggctggtagaaccggtaga
actgtgattgttcatttgcccgggggggacctgaagattgaatggcaggaaggtcagcag
gtccatatgacgggtccagcagtctgtgtttttcgcggaagtacgcttgaatcataa
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